Gene : Glyma.15G012200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23074:SF19 - KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 Genomic Order:  122
Name:  ? Glyma.15G012200 Secondary Identifier:  ? PAC:30497529
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G012200 0.5kb upstream 0.5kb upstream 4131 true Chr15: 976439-980569 Glycine max
Glyma.15G012200 0.5kb upstream 0.5kb upstream 500 false Chr15: 980070-980569 Glycine max
Glyma.15G012200 0.5kb downstream 0.5kb downstream 4131 true Chr15: 975939-980069 Glycine max
Glyma.15G012200 0.5kb downstream 0.5kb downstream 500 false Chr15: 975939-976438 Glycine max
Glyma.15G012200 1.0kb upstream 1.0kb upstream 4631 true Chr15: 976439-981069 Glycine max
Glyma.15G012200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 980070-981069 Glycine max
Glyma.15G012200 1.0kb downstream 1.0kb downstream 4631 true Chr15: 975439-980069 Glycine max
Glyma.15G012200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 975439-976438 Glycine max
Glyma.15G012200 2.0kb upstream 2.0kb upstream 5631 true Chr15: 976439-982069 Glycine max
Glyma.15G012200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 980070-982069 Glycine max
Glyma.15G012200 2.0kb downstream 2.0kb downstream 5631 true Chr15: 974439-980069 Glycine max
Glyma.15G012200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 974439-976438 Glycine max
Glyma.15G012200 5.0kb upstream 5.0kb upstream 8631 true Chr15: 976439-985069 Glycine max
Glyma.15G012200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 980070-985069 Glycine max
Glyma.15G012200 5.0kb downstream 5.0kb downstream 8631 true Chr15: 971439-980069 Glycine max
Glyma.15G012200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 971439-976438 Glycine max
Glyma.15G012200 10.0kb upstream 10.0kb upstream 13631 true Chr15: 976439-990069 Glycine max
Glyma.15G012200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 980070-990069 Glycine max
Glyma.15G012200 10.0kb downstream 10.0kb downstream 13631 true Chr15: 966439-980069 Glycine max
Glyma.15G012200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 966439-976438 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121614879 5273 Angiosperm Singleton cluster - no MSA
122249471 5265 Fabidae Singleton cluster - no MSA
123992901 5270 Rosid Singleton cluster - no MSA
123567733 5271 Pentapetalae Singleton cluster - no MSA
122602484 5272 Eudicot Singleton cluster - no MSA
121352094 5274 Embryophyte View MSA
123426944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.24961 0.0 9.5724    
cufflinks 4.94859 0.0 13.895    
cufflinks 2.26199 0.0 7.01184   Low
cufflinks 10.2952 0.0 27.554    
cufflinks 4.19966 0.0 11.9664    
cufflinks 4.62985 0.0 13.062    
cufflinks 11.8246 0.0 31.5699   High
cufflinks 12.7698 0.0 34.072   High
cufflinks 6.3871 0.0 17.5208    
cufflinks 4.255       High
cufflinks 1.376       Low
cufflinks 1.719        
cufflinks 2.985        
cufflinks 2.215        
cufflinks 0.993       Low
cufflinks 2.329        
cufflinks 2.446        
cufflinks 2.668        
cufflinks 4.134       High
cufflinks 1.765        
cufflinks 1.708        
cufflinks 1.97        
cufflinks 1.665        
cufflinks 1.753        
cufflinks 2.032        
cufflinks 2.18        

0 Strain