Gene : Glyma.15G013200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  132
Name:  ? Glyma.15G013200 Secondary Identifier:  ? PAC:30497263
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G013200 0.5kb upstream 0.5kb upstream 5520 true Chr15: 1060400-1065919 Glycine max
Glyma.15G013200 0.5kb upstream 0.5kb upstream 500 false Chr15: 1060400-1060899 Glycine max
Glyma.15G013200 0.5kb downstream 0.5kb downstream 5520 true Chr15: 1060900-1066419 Glycine max
Glyma.15G013200 0.5kb downstream 0.5kb downstream 500 false Chr15: 1065920-1066419 Glycine max
Glyma.15G013200 1.0kb upstream 1.0kb upstream 6020 true Chr15: 1059900-1065919 Glycine max
Glyma.15G013200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1059900-1060899 Glycine max
Glyma.15G013200 1.0kb downstream 1.0kb downstream 6020 true Chr15: 1060900-1066919 Glycine max
Glyma.15G013200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1065920-1066919 Glycine max
Glyma.15G013200 2.0kb upstream 2.0kb upstream 7020 true Chr15: 1058900-1065919 Glycine max
Glyma.15G013200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1058900-1060899 Glycine max
Glyma.15G013200 2.0kb downstream 2.0kb downstream 7020 true Chr15: 1060900-1067919 Glycine max
Glyma.15G013200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1065920-1067919 Glycine max
Glyma.15G013200 5.0kb upstream 5.0kb upstream 10020 true Chr15: 1055900-1065919 Glycine max
Glyma.15G013200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1055900-1060899 Glycine max
Glyma.15G013200 5.0kb downstream 5.0kb downstream 10020 true Chr15: 1060900-1070919 Glycine max
Glyma.15G013200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1065920-1070919 Glycine max
Glyma.15G013200 10.0kb upstream 10.0kb upstream 15020 true Chr15: 1050900-1065919 Glycine max
Glyma.15G013200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1050900-1060899 Glycine max
Glyma.15G013200 10.0kb downstream 10.0kb downstream 15020 true Chr15: 1060900-1075919 Glycine max
Glyma.15G013200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1065920-1075919 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312102 5265 Fabidae View MSA
124069711 5270 Rosid View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.389107 0.0 1.41221   Low
cufflinks 9.47516 0.0 25.2863   High
cufflinks 2.32867 0.0 6.89718    
cufflinks 4.03261 0.0 11.2241    
cufflinks 6.34106 0.0 17.1133    
cufflinks 3.70729 0.0 10.4088    
cufflinks 4.80133 0.0 13.1993    
cufflinks 3.04958 0.0 8.73864    
cufflinks 5.03763 0.0 13.7757    
cufflinks 3.399        
cufflinks 0.758       Low
cufflinks 3.386        
cufflinks 6.241        
cufflinks 7.908     High High
cufflinks 0.815       Low
cufflinks 5.94        
cufflinks 0.787       Low
cufflinks 2.995        
cufflinks 10.082     High High
cufflinks 4.214        
cufflinks 1.512        
cufflinks 5.052        
cufflinks 7.155       High
cufflinks 1.115       Low
cufflinks 3.938        
cufflinks 1.881        

0 Strain