Gene : Glyma.15G005300 G. max Wm82.a2.v1
Defline:  (1 of 1) PF02148//PF07576//PF13639 - Zn-finger in ubiquitin-hydrolases and other protein (zf-UBP) // BRCA1-associated protein 2 (BRAP2) // Ring finger domain (zf-RING_2) Genomic Order:  53
Name:  ? Glyma.15G005300 Secondary Identifier:  ? PAC:30498078
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G005300 0.5kb upstream 0.5kb upstream 3903 true Chr15: 463317-467219 Glycine max
Glyma.15G005300 0.5kb upstream 0.5kb upstream 500 false Chr15: 466720-467219 Glycine max
Glyma.15G005300 0.5kb downstream 0.5kb downstream 3903 true Chr15: 462817-466719 Glycine max
Glyma.15G005300 0.5kb downstream 0.5kb downstream 500 false Chr15: 462817-463316 Glycine max
Glyma.15G005300 1.0kb upstream 1.0kb upstream 4403 true Chr15: 463317-467719 Glycine max
Glyma.15G005300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 466720-467719 Glycine max
Glyma.15G005300 1.0kb downstream 1.0kb downstream 4403 true Chr15: 462317-466719 Glycine max
Glyma.15G005300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 462317-463316 Glycine max
Glyma.15G005300 2.0kb upstream 2.0kb upstream 5403 true Chr15: 463317-468719 Glycine max
Glyma.15G005300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 466720-468719 Glycine max
Glyma.15G005300 2.0kb downstream 2.0kb downstream 5403 true Chr15: 461317-466719 Glycine max
Glyma.15G005300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 461317-463316 Glycine max
Glyma.15G005300 5.0kb upstream 5.0kb upstream 8403 true Chr15: 463317-471719 Glycine max
Glyma.15G005300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 466720-471719 Glycine max
Glyma.15G005300 5.0kb downstream 5.0kb downstream 8403 true Chr15: 458317-466719 Glycine max
Glyma.15G005300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 458317-463316 Glycine max
Glyma.15G005300 10.0kb upstream 10.0kb upstream 13403 true Chr15: 463317-476719 Glycine max
Glyma.15G005300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 466720-476719 Glycine max
Glyma.15G005300 10.0kb downstream 10.0kb downstream 13403 true Chr15: 453317-466719 Glycine max
Glyma.15G005300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 453317-463316 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300036 5265 Fabidae View MSA
124067459 5270 Rosid View MSA
123739664 5271 Pentapetalae View MSA
122788885 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0189 0.0 29.5576    
cufflinks 7.82806 0.0 21.3688    
cufflinks 14.3354 0.0 38.2469   High
cufflinks 8.39072 0.0 22.7814    
cufflinks 8.4248 0.0 22.8946    
cufflinks 12.08 0.0 32.3179   High
cufflinks 6.43694 0.0 17.8558   Low
cufflinks 8.42048 0.0 22.8661    
cufflinks 9.55573 0.0 25.7795    
cufflinks 5.766       Low
cufflinks 8.502     High  
cufflinks 8.731     High  
cufflinks 7.037        
cufflinks 6.544       Low
cufflinks 5.395     High Low
cufflinks 11.371     High  
cufflinks 7.804     High  
cufflinks 7.653     High  
cufflinks 7.851     High  
cufflinks 12.691     High High
cufflinks 9.807     High  
cufflinks 12.212     High High
cufflinks 7.463        
cufflinks 11.396     High  
cufflinks 11.623     High High
cufflinks 11.913     High High

0 Strain