Gene : Glyma.15G006100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Genomic Order:  61
Name:  ? Glyma.15G006100 Secondary Identifier:  ? PAC:30497364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G006100 0.5kb upstream 0.5kb upstream 9177 true Chr15: 529118-538294 Glycine max
Glyma.15G006100 0.5kb upstream 0.5kb upstream 500 false Chr15: 529118-529617 Glycine max
Glyma.15G006100 0.5kb downstream 0.5kb downstream 9177 true Chr15: 529618-538794 Glycine max
Glyma.15G006100 0.5kb downstream 0.5kb downstream 500 false Chr15: 538295-538794 Glycine max
Glyma.15G006100 1.0kb upstream 1.0kb upstream 9677 true Chr15: 528618-538294 Glycine max
Glyma.15G006100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 528618-529617 Glycine max
Glyma.15G006100 1.0kb downstream 1.0kb downstream 9677 true Chr15: 529618-539294 Glycine max
Glyma.15G006100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 538295-539294 Glycine max
Glyma.15G006100 2.0kb upstream 2.0kb upstream 10677 true Chr15: 527618-538294 Glycine max
Glyma.15G006100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 527618-529617 Glycine max
Glyma.15G006100 2.0kb downstream 2.0kb downstream 10677 true Chr15: 529618-540294 Glycine max
Glyma.15G006100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 538295-540294 Glycine max
Glyma.15G006100 5.0kb upstream 5.0kb upstream 13677 true Chr15: 524618-538294 Glycine max
Glyma.15G006100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 524618-529617 Glycine max
Glyma.15G006100 5.0kb downstream 5.0kb downstream 13677 true Chr15: 529618-543294 Glycine max
Glyma.15G006100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 538295-543294 Glycine max
Glyma.15G006100 10.0kb upstream 10.0kb upstream 18677 true Chr15: 519618-538294 Glycine max
Glyma.15G006100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 519618-529617 Glycine max
Glyma.15G006100 10.0kb downstream 10.0kb downstream 18677 true Chr15: 529618-548294 Glycine max
Glyma.15G006100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 538295-548294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784042 5273 Angiosperm View MSA
122249495 5265 Fabidae Singleton cluster - no MSA
124052328 5270 Rosid View MSA
123755880 5271 Pentapetalae View MSA
122777090 5272 Eudicot View MSA
121055477 5274 Embryophyte View MSA
123095408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59183 0.0 10.0228   Low
cufflinks 5.48369 0.0 18.021    
cufflinks 2.77369 0.0 14.5556    
cufflinks 5.46127 0.0 19.2894    
cufflinks 4.65983 0.0 15.2548    
cufflinks 2.00148 0.0 9.27952   Low
cufflinks 5.90449 0.0 19.3453   High
cufflinks 4.87609 0.0 16.3703    
cufflinks 3.42756 0.0 11.7271    
cufflinks 1.091        
cufflinks 0.227       Low
cufflinks 1.686        
cufflinks 1.531        
cufflinks 1.856       High
cufflinks 0.805        
cufflinks 0.68        
cufflinks 0.86        
cufflinks 2.106       High
cufflinks 3.134       High
cufflinks 0.639        
cufflinks 0.343       Low
cufflinks 0.827        
cufflinks 0.891        
cufflinks 0.333       Low
cufflinks 0.685        
cufflinks 0.717        

0 Strain