Gene : Glyma.15G006400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10371 - NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL Genomic Order:  64
Name:  ? Glyma.15G006400 Secondary Identifier:  ? PAC:30495684
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G006400 0.5kb upstream 0.5kb upstream 4772 true Chr15: 546560-551331 Glycine max
Glyma.15G006400 0.5kb upstream 0.5kb upstream 500 false Chr15: 550832-551331 Glycine max
Glyma.15G006400 0.5kb downstream 0.5kb downstream 4772 true Chr15: 546060-550831 Glycine max
Glyma.15G006400 0.5kb downstream 0.5kb downstream 500 false Chr15: 546060-546559 Glycine max
Glyma.15G006400 1.0kb upstream 1.0kb upstream 5272 true Chr15: 546560-551831 Glycine max
Glyma.15G006400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 550832-551831 Glycine max
Glyma.15G006400 1.0kb downstream 1.0kb downstream 5272 true Chr15: 545560-550831 Glycine max
Glyma.15G006400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 545560-546559 Glycine max
Glyma.15G006400 2.0kb upstream 2.0kb upstream 6272 true Chr15: 546560-552831 Glycine max
Glyma.15G006400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 550832-552831 Glycine max
Glyma.15G006400 2.0kb downstream 2.0kb downstream 6272 true Chr15: 544560-550831 Glycine max
Glyma.15G006400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 544560-546559 Glycine max
Glyma.15G006400 5.0kb upstream 5.0kb upstream 9272 true Chr15: 546560-555831 Glycine max
Glyma.15G006400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 550832-555831 Glycine max
Glyma.15G006400 5.0kb downstream 5.0kb downstream 9272 true Chr15: 541560-550831 Glycine max
Glyma.15G006400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 541560-546559 Glycine max
Glyma.15G006400 10.0kb upstream 10.0kb upstream 14272 true Chr15: 546560-560831 Glycine max
Glyma.15G006400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 550832-560831 Glycine max
Glyma.15G006400 10.0kb downstream 10.0kb downstream 14272 true Chr15: 536560-550831 Glycine max
Glyma.15G006400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 536560-546559 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306098 5265 Fabidae View MSA
124065216 5270 Rosid View MSA
123739093 5271 Pentapetalae View MSA
122789216 5272 Eudicot View MSA
122047748 5273 Angiosperm View MSA
121350810 5274 Embryophyte View MSA
123425059 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5992 0.0 60.4121 High Low
cufflinks 44.839 0.0 124.851 High  
cufflinks 19.8315 0.0 52.9282   Low
cufflinks 32.7966 0.0 89.0438 High  
cufflinks 59.4017 0.0 170.883 High High
cufflinks 47.5835 0.0 133.386 High  
cufflinks 61.9691 0.0 179.283 High High
cufflinks 36.9119 0.0 101.171 High  
cufflinks 47.9393 0.0 134.586 High  
cufflinks 16.073     High High
cufflinks 7.89     High Low
cufflinks 7.897     High Low
cufflinks 19.06     High High
cufflinks 20.194     High High
cufflinks 12.943     High  
cufflinks 10.856     High  
cufflinks 6.935     High Low
cufflinks 11.697     High  
cufflinks 13.951     High  
cufflinks 10.604     High  
cufflinks 8.589     High  
cufflinks 10.936     High  
cufflinks 10.132     High  
cufflinks 8.16     High  
cufflinks 10.185     High  
cufflinks 10.093     High  

0 Strain