Gene : Glyma.15G000400 G. max Wm82.a2.v1
Genomic Order:  4 Name:  ? Glyma.15G000400
Secondary Identifier:  ? PAC:30496130
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G000400 0.5kb upstream 0.5kb upstream 4232 true Chr15: 50300-54531 Glycine max
Glyma.15G000400 0.5kb upstream 0.5kb upstream 500 false Chr15: 50300-50799 Glycine max
Glyma.15G000400 0.5kb downstream 0.5kb downstream 4232 true Chr15: 50800-55031 Glycine max
Glyma.15G000400 0.5kb downstream 0.5kb downstream 500 false Chr15: 54532-55031 Glycine max
Glyma.15G000400 1.0kb upstream 1.0kb upstream 4732 true Chr15: 49800-54531 Glycine max
Glyma.15G000400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 49800-50799 Glycine max
Glyma.15G000400 1.0kb downstream 1.0kb downstream 4732 true Chr15: 50800-55531 Glycine max
Glyma.15G000400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 54532-55531 Glycine max
Glyma.15G000400 2.0kb upstream 2.0kb upstream 5732 true Chr15: 48800-54531 Glycine max
Glyma.15G000400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 48800-50799 Glycine max
Glyma.15G000400 2.0kb downstream 2.0kb downstream 5732 true Chr15: 50800-56531 Glycine max
Glyma.15G000400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 54532-56531 Glycine max
Glyma.15G000400 5.0kb upstream 5.0kb upstream 8732 true Chr15: 45800-54531 Glycine max
Glyma.15G000400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 45800-50799 Glycine max
Glyma.15G000400 5.0kb downstream 5.0kb downstream 8732 true Chr15: 50800-59531 Glycine max
Glyma.15G000400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 54532-59531 Glycine max
Glyma.15G000400 10.0kb upstream 10.0kb upstream 13732 true Chr15: 40800-54531 Glycine max
Glyma.15G000400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 40800-50799 Glycine max
Glyma.15G000400 10.0kb downstream 10.0kb downstream 13732 true Chr15: 50800-64531 Glycine max
Glyma.15G000400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 54532-64531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311011 5265 Fabidae View MSA
124062606 5270 Rosid View MSA
123737613 5271 Pentapetalae View MSA
122786141 5272 Eudicot View MSA
122051130 5273 Angiosperm View MSA
121349570 5274 Embryophyte View MSA
123425322 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.3411 0.0 135.114 High High
cufflinks 15.8838 0.0 57.7224    
cufflinks 10.9031 0.0 44.4172    
cufflinks 13.1608 0.0 57.4218    
cufflinks 5.0832 0.0 25.5343   Low
cufflinks 7.81909 0.0 34.3817    
cufflinks 10.603 0.0 43.5374    
cufflinks 21.0679 0.0 81.0275    
cufflinks 7.94217 0.0 37.2702    
cufflinks 2.816        
cufflinks 0.451       Low
cufflinks 2.075        
cufflinks 0.501       Low
cufflinks 0.497       Low
cufflinks 0.77        
cufflinks 6.727       High
cufflinks 0.717        
cufflinks 1.891        
cufflinks 2.83        
cufflinks 7.682     High High
cufflinks 0.504       Low
cufflinks 7.272     High High
cufflinks 5.031        
cufflinks 0.575        
cufflinks 7.453     High High
cufflinks 0.567        

0 Strain