Gene : Glyma.15G038400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21726//PTHR21726:SF39 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  384
Name:  ? Glyma.15G038400 Secondary Identifier:  ? PAC:30496936
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G038400 0.5kb upstream 0.5kb upstream 5556 true Chr15: 3026272-3031827 Glycine max
Glyma.15G038400 0.5kb upstream 0.5kb upstream 500 false Chr15: 3031328-3031827 Glycine max
Glyma.15G038400 0.5kb downstream 0.5kb downstream 5556 true Chr15: 3025772-3031327 Glycine max
Glyma.15G038400 0.5kb downstream 0.5kb downstream 500 false Chr15: 3025772-3026271 Glycine max
Glyma.15G038400 1.0kb upstream 1.0kb upstream 6056 true Chr15: 3026272-3032327 Glycine max
Glyma.15G038400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3031328-3032327 Glycine max
Glyma.15G038400 1.0kb downstream 1.0kb downstream 6056 true Chr15: 3025272-3031327 Glycine max
Glyma.15G038400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3025272-3026271 Glycine max
Glyma.15G038400 2.0kb upstream 2.0kb upstream 7056 true Chr15: 3026272-3033327 Glycine max
Glyma.15G038400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3031328-3033327 Glycine max
Glyma.15G038400 2.0kb downstream 2.0kb downstream 7056 true Chr15: 3024272-3031327 Glycine max
Glyma.15G038400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3024272-3026271 Glycine max
Glyma.15G038400 5.0kb upstream 5.0kb upstream 10056 true Chr15: 3026272-3036327 Glycine max
Glyma.15G038400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3031328-3036327 Glycine max
Glyma.15G038400 5.0kb downstream 5.0kb downstream 10056 true Chr15: 3021272-3031327 Glycine max
Glyma.15G038400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3021272-3026271 Glycine max
Glyma.15G038400 10.0kb upstream 10.0kb upstream 15056 true Chr15: 3026272-3041327 Glycine max
Glyma.15G038400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3031328-3041327 Glycine max
Glyma.15G038400 10.0kb downstream 10.0kb downstream 15056 true Chr15: 3016272-3031327 Glycine max
Glyma.15G038400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3016272-3026271 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313122 5265 Fabidae View MSA
124071026 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.00521 0.0 21.0632    
cufflinks 0.376672 0.0 1.69986    
cufflinks 12.0358 0.0 41.7572   High
cufflinks 0.22995 0.0 1.48115    
cufflinks 2.00213 0.0 8.97832    
cufflinks 4.73467 0.0 17.0911    
cufflinks 0.0111723 0.0 0.04903 Low Low
cufflinks 1.23528 0.0 6.45814    
cufflinks 4.4385 0.0 16.2063    
cufflinks 0.717        
cufflinks 7.487     High High
cufflinks 1.396        
cufflinks 0.195        
cufflinks 0.144        
cufflinks 2.665        
cufflinks 0.162        
cufflinks 1.521        
cufflinks 0.15        
cufflinks 0.12        
cufflinks 0.149        
cufflinks 5.312       High
cufflinks 0.18        
cufflinks 0.126        
cufflinks 7.857     High High
cufflinks 0.13        
cufflinks 2.811        

0 Strain