Gene : Glyma.15G039100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  391
Name:  ? Glyma.15G039100 Secondary Identifier:  ? PAC:30496651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G039100 0.5kb upstream 0.5kb upstream 4036 true Chr15: 3078440-3082475 Glycine max
Glyma.15G039100 0.5kb upstream 0.5kb upstream 500 false Chr15: 3081976-3082475 Glycine max
Glyma.15G039100 0.5kb downstream 0.5kb downstream 4036 true Chr15: 3077940-3081975 Glycine max
Glyma.15G039100 0.5kb downstream 0.5kb downstream 500 false Chr15: 3077940-3078439 Glycine max
Glyma.15G039100 1.0kb upstream 1.0kb upstream 4536 true Chr15: 3078440-3082975 Glycine max
Glyma.15G039100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3081976-3082975 Glycine max
Glyma.15G039100 1.0kb downstream 1.0kb downstream 4536 true Chr15: 3077440-3081975 Glycine max
Glyma.15G039100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3077440-3078439 Glycine max
Glyma.15G039100 2.0kb upstream 2.0kb upstream 5536 true Chr15: 3078440-3083975 Glycine max
Glyma.15G039100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3081976-3083975 Glycine max
Glyma.15G039100 2.0kb downstream 2.0kb downstream 5536 true Chr15: 3076440-3081975 Glycine max
Glyma.15G039100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3076440-3078439 Glycine max
Glyma.15G039100 5.0kb upstream 5.0kb upstream 8536 true Chr15: 3078440-3086975 Glycine max
Glyma.15G039100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3081976-3086975 Glycine max
Glyma.15G039100 5.0kb downstream 5.0kb downstream 8536 true Chr15: 3073440-3081975 Glycine max
Glyma.15G039100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3073440-3078439 Glycine max
Glyma.15G039100 10.0kb upstream 10.0kb upstream 13536 true Chr15: 3078440-3091975 Glycine max
Glyma.15G039100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3081976-3091975 Glycine max
Glyma.15G039100 10.0kb downstream 10.0kb downstream 13536 true Chr15: 3068440-3081975 Glycine max
Glyma.15G039100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3068440-3078439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310561 5265 Fabidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.75019 0.0 23.6404   Low
cufflinks 25.1098 0.0 68.107 High  
cufflinks 8.51655 0.0 23.0178   Low
cufflinks 38.3063 0.0 107.718 High High
cufflinks 25.4479 0.0 69.0738 High  
cufflinks 14.9334 0.0 39.8438    
cufflinks 20.8828 0.0 56.0917    
cufflinks 37.7669 0.0 106.135 High High
cufflinks 13.3808 0.0 35.7066    
cufflinks 17.623     High High
cufflinks 2.007       Low
cufflinks 8.245     High  
cufflinks 14.905     High High
cufflinks 20.144     High High
cufflinks 2.576       Low
cufflinks 4.8        
cufflinks 5.318        
cufflinks 13.126     High High
cufflinks 6.28        
cufflinks 6.033        
cufflinks 5.501        
cufflinks 6.207        
cufflinks 4.331        
cufflinks 3.925        
cufflinks 5.753        
cufflinks 2.371       Low

0 Strain