Gene : Glyma.15G039900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30509//PTHR30509:SF7 - P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED Genomic Order:  399
Name:  ? Glyma.15G039900 Secondary Identifier:  ? PAC:30497386
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G039900 0.5kb upstream 0.5kb upstream 14080 true Chr15: 3143830-3157909 Glycine max
Glyma.15G039900 0.5kb upstream 0.5kb upstream 500 false Chr15: 3143830-3144329 Glycine max
Glyma.15G039900 0.5kb downstream 0.5kb downstream 14080 true Chr15: 3144330-3158409 Glycine max
Glyma.15G039900 0.5kb downstream 0.5kb downstream 500 false Chr15: 3157910-3158409 Glycine max
Glyma.15G039900 1.0kb upstream 1.0kb upstream 14580 true Chr15: 3143330-3157909 Glycine max
Glyma.15G039900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3143330-3144329 Glycine max
Glyma.15G039900 1.0kb downstream 1.0kb downstream 14580 true Chr15: 3144330-3158909 Glycine max
Glyma.15G039900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3157910-3158909 Glycine max
Glyma.15G039900 2.0kb upstream 2.0kb upstream 15580 true Chr15: 3142330-3157909 Glycine max
Glyma.15G039900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3142330-3144329 Glycine max
Glyma.15G039900 2.0kb downstream 2.0kb downstream 15580 true Chr15: 3144330-3159909 Glycine max
Glyma.15G039900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3157910-3159909 Glycine max
Glyma.15G039900 5.0kb upstream 5.0kb upstream 18580 true Chr15: 3139330-3157909 Glycine max
Glyma.15G039900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3139330-3144329 Glycine max
Glyma.15G039900 5.0kb downstream 5.0kb downstream 18580 true Chr15: 3144330-3162909 Glycine max
Glyma.15G039900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3157910-3162909 Glycine max
Glyma.15G039900 10.0kb upstream 10.0kb upstream 23580 true Chr15: 3134330-3157909 Glycine max
Glyma.15G039900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3134330-3144329 Glycine max
Glyma.15G039900 10.0kb downstream 10.0kb downstream 23580 true Chr15: 3144330-3167909 Glycine max
Glyma.15G039900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3157910-3167909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782961 5273 Angiosperm View MSA
122249493 5265 Fabidae Singleton cluster - no MSA
123992919 5270 Rosid Singleton cluster - no MSA
123754185 5271 Pentapetalae View MSA
122775582 5272 Eudicot View MSA
121054457 5274 Embryophyte View MSA
123094439 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0246549 0.0 0.105067 Low  
cufflinks 0.0471934 0.0 0.192538 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.296253 0.0 1.1214   High
cufflinks 0.0206556 0.0 0.0891891 Low  
cufflinks 0.0453223 0.0 0.185302 Low  
cufflinks 0.0107597 0.0 0.0492818 Low Low
cufflinks 0.394988 0.0 1.47554   High
cufflinks 0.0841245 0.0 0.334866 Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.007     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.001     Low Low
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low Low

0 Strain