Gene : Glyma.15G040400 G. max Wm82.a2.v1
Defline:  (1 of 16) KOG1756 - Histone 2A Genomic Order:  404
Name:  ? Glyma.15G040400 Secondary Identifier:  ? PAC:30496723
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G040400 0.5kb upstream 0.5kb upstream 1425 true Chr15: 3182942-3184366 Glycine max
Glyma.15G040400 0.5kb upstream 0.5kb upstream 500 false Chr15: 3182942-3183441 Glycine max
Glyma.15G040400 0.5kb downstream 0.5kb downstream 1425 true Chr15: 3183442-3184866 Glycine max
Glyma.15G040400 0.5kb downstream 0.5kb downstream 500 false Chr15: 3184367-3184866 Glycine max
Glyma.15G040400 1.0kb upstream 1.0kb upstream 1925 true Chr15: 3182442-3184366 Glycine max
Glyma.15G040400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3182442-3183441 Glycine max
Glyma.15G040400 1.0kb downstream 1.0kb downstream 1925 true Chr15: 3183442-3185366 Glycine max
Glyma.15G040400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3184367-3185366 Glycine max
Glyma.15G040400 2.0kb upstream 2.0kb upstream 2925 true Chr15: 3181442-3184366 Glycine max
Glyma.15G040400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3181442-3183441 Glycine max
Glyma.15G040400 2.0kb downstream 2.0kb downstream 2925 true Chr15: 3183442-3186366 Glycine max
Glyma.15G040400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3184367-3186366 Glycine max
Glyma.15G040400 5.0kb upstream 5.0kb upstream 5925 true Chr15: 3178442-3184366 Glycine max
Glyma.15G040400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3178442-3183441 Glycine max
Glyma.15G040400 5.0kb downstream 5.0kb downstream 5925 true Chr15: 3183442-3189366 Glycine max
Glyma.15G040400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3184367-3189366 Glycine max
Glyma.15G040400 10.0kb upstream 10.0kb upstream 10925 true Chr15: 3173442-3184366 Glycine max
Glyma.15G040400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3173442-3183441 Glycine max
Glyma.15G040400 10.0kb downstream 10.0kb downstream 10925 true Chr15: 3183442-3194366 Glycine max
Glyma.15G040400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3184367-3194366 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312228 5265 Fabidae View MSA
124071077 5270 Rosid View MSA
123750361 5271 Pentapetalae View MSA
122788374 5272 Eudicot View MSA
122048599 5273 Angiosperm View MSA
121351397 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.918 0.0 52.4227   Low
cufflinks 113.304 0.0 316.03 High High
cufflinks 38.5344 0.0 102.975 High  
cufflinks 36.1156 0.0 96.5798 High  
cufflinks 67.0 0.0 180.578 High  
cufflinks 79.841 0.0 216.891 High  
cufflinks 78.9608 0.0 214.452 High  
cufflinks 46.747 0.0 124.722 High  
cufflinks 64.1028 0.0 172.289 High  
cufflinks 53.626     High  
cufflinks 29.975     High  
cufflinks 34.3     High  
cufflinks 67.44     High  
cufflinks 72.855     High High
cufflinks 21.103     High Low
cufflinks 64.433     High  
cufflinks 40.934     High  
cufflinks 29.499     High  
cufflinks 77.952     High High
cufflinks 43.499     High  
cufflinks 26.193     High Low
cufflinks 52.528     High  
cufflinks 115.809     High High
cufflinks 26.119     High Low
cufflinks 49.509     High  
cufflinks 33.669     High  

0 Strain