Gene : Glyma.15G040700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Genomic Order:  407
Name:  ? Glyma.15G040700 Secondary Identifier:  ? PAC:30499701
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G040700 0.5kb upstream 0.5kb upstream 1387 true Chr15: 3194771-3196157 Glycine max
Glyma.15G040700 0.5kb upstream 0.5kb upstream 500 false Chr15: 3195658-3196157 Glycine max
Glyma.15G040700 0.5kb downstream 0.5kb downstream 1387 true Chr15: 3194271-3195657 Glycine max
Glyma.15G040700 0.5kb downstream 0.5kb downstream 500 false Chr15: 3194271-3194770 Glycine max
Glyma.15G040700 1.0kb upstream 1.0kb upstream 1887 true Chr15: 3194771-3196657 Glycine max
Glyma.15G040700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3195658-3196657 Glycine max
Glyma.15G040700 1.0kb downstream 1.0kb downstream 1887 true Chr15: 3193771-3195657 Glycine max
Glyma.15G040700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3193771-3194770 Glycine max
Glyma.15G040700 2.0kb upstream 2.0kb upstream 2887 true Chr15: 3194771-3197657 Glycine max
Glyma.15G040700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3195658-3197657 Glycine max
Glyma.15G040700 2.0kb downstream 2.0kb downstream 2887 true Chr15: 3192771-3195657 Glycine max
Glyma.15G040700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3192771-3194770 Glycine max
Glyma.15G040700 5.0kb upstream 5.0kb upstream 5887 true Chr15: 3194771-3200657 Glycine max
Glyma.15G040700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3195658-3200657 Glycine max
Glyma.15G040700 5.0kb downstream 5.0kb downstream 5887 true Chr15: 3189771-3195657 Glycine max
Glyma.15G040700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3189771-3194770 Glycine max
Glyma.15G040700 10.0kb upstream 10.0kb upstream 10887 true Chr15: 3194771-3205657 Glycine max
Glyma.15G040700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3195658-3205657 Glycine max
Glyma.15G040700 10.0kb downstream 10.0kb downstream 10887 true Chr15: 3184771-3195657 Glycine max
Glyma.15G040700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3184771-3194770 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314354 5265 Fabidae View MSA
124071249 5270 Rosid View MSA
123747694 5271 Pentapetalae View MSA
122796352 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0078 0.0 42.2822   High
cufflinks 0.221973 0.0 0.880249 Low Low
cufflinks 2.83831 0.0 9.86544    
cufflinks 1.01325 0.0 3.77109    
cufflinks 0.616167 0.0 2.34707    
cufflinks 0.587456 0.0 2.24107    
cufflinks 0.970491 0.0 3.62268    
cufflinks 2.77869 0.0 9.6659    
cufflinks 0.282241 0.0 1.10925   Low
cufflinks 8.225     High  
cufflinks 31.626     High High
cufflinks 20.005     High  
cufflinks 1.194        
cufflinks 0.089       Low
cufflinks 22.707     High High
cufflinks 3.372        
cufflinks 17.898     High  
cufflinks 9.908     High  
cufflinks 0.514       Low
cufflinks 1.162        
cufflinks 9.293     High  
cufflinks 2.371        
cufflinks 1.495        
cufflinks 13.189     High  
cufflinks 0.44       Low
cufflinks 15.627     High  

0 Strain