Gene : Glyma.15G041500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11620//PTHR11620:SF14 - 60S RIBOSOMAL PROTEIN L23A Genomic Order:  415
Name:  ? Glyma.15G041500 Secondary Identifier:  ? PAC:30499595
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G041500 0.5kb upstream 0.5kb upstream 2058 true Chr15: 3255042-3257099 Glycine max
Glyma.15G041500 0.5kb upstream 0.5kb upstream 500 false Chr15: 3256600-3257099 Glycine max
Glyma.15G041500 0.5kb downstream 0.5kb downstream 2058 true Chr15: 3254542-3256599 Glycine max
Glyma.15G041500 0.5kb downstream 0.5kb downstream 500 false Chr15: 3254542-3255041 Glycine max
Glyma.15G041500 1.0kb upstream 1.0kb upstream 2558 true Chr15: 3255042-3257599 Glycine max
Glyma.15G041500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3256600-3257599 Glycine max
Glyma.15G041500 1.0kb downstream 1.0kb downstream 2558 true Chr15: 3254042-3256599 Glycine max
Glyma.15G041500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3254042-3255041 Glycine max
Glyma.15G041500 2.0kb upstream 2.0kb upstream 3558 true Chr15: 3255042-3258599 Glycine max
Glyma.15G041500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3256600-3258599 Glycine max
Glyma.15G041500 2.0kb downstream 2.0kb downstream 3558 true Chr15: 3253042-3256599 Glycine max
Glyma.15G041500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3253042-3255041 Glycine max
Glyma.15G041500 5.0kb upstream 5.0kb upstream 6558 true Chr15: 3255042-3261599 Glycine max
Glyma.15G041500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3256600-3261599 Glycine max
Glyma.15G041500 5.0kb downstream 5.0kb downstream 6558 true Chr15: 3250042-3256599 Glycine max
Glyma.15G041500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3250042-3255041 Glycine max
Glyma.15G041500 10.0kb upstream 10.0kb upstream 11558 true Chr15: 3255042-3266599 Glycine max
Glyma.15G041500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3256600-3266599 Glycine max
Glyma.15G041500 10.0kb downstream 10.0kb downstream 11558 true Chr15: 3245042-3256599 Glycine max
Glyma.15G041500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3245042-3255041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241041 5265 Fabidae Singleton cluster - no MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.975 0.0 164.037 High  
cufflinks 73.5686 0.0 264.377 High  
cufflinks 22.7331 0.0 79.019 High Low
cufflinks 50.6398 0.0 174.843 High  
cufflinks 102.549 0.0 340.25 High High
cufflinks 68.9585 0.0 212.087 High  
cufflinks 68.4752 0.0 241.448 High  
cufflinks 58.5795 0.0 178.046 High  
cufflinks 69.6829 0.0 249.309 High  
cufflinks 13.64     High  
cufflinks 3.213       Low
cufflinks 11.991     High  
cufflinks 34.703     High High
cufflinks 49.55     High High
cufflinks 2.817       Low
cufflinks 11.502     High  
cufflinks 8.502     High  
cufflinks 14.605     High  
cufflinks 18.094     High  
cufflinks 8.765     High  
cufflinks 5.144        
cufflinks 9.333     High  
cufflinks 16.509     High  
cufflinks 4.28       Low
cufflinks 10.359     High  
cufflinks 6.81     High  

0 Strain