Gene : Glyma.15G042300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR13872 - 60S RIBOSOMAL PROTEIN L35 Genomic Order:  423
Name:  ? Glyma.15G042300 Secondary Identifier:  ? PAC:30496666
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G042300 0.5kb upstream 0.5kb upstream 2230 true Chr15: 3306611-3308840 Glycine max
Glyma.15G042300 0.5kb upstream 0.5kb upstream 500 false Chr15: 3306611-3307110 Glycine max
Glyma.15G042300 0.5kb downstream 0.5kb downstream 2230 true Chr15: 3307111-3309340 Glycine max
Glyma.15G042300 0.5kb downstream 0.5kb downstream 500 false Chr15: 3308841-3309340 Glycine max
Glyma.15G042300 1.0kb upstream 1.0kb upstream 2730 true Chr15: 3306111-3308840 Glycine max
Glyma.15G042300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3306111-3307110 Glycine max
Glyma.15G042300 1.0kb downstream 1.0kb downstream 2730 true Chr15: 3307111-3309840 Glycine max
Glyma.15G042300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3308841-3309840 Glycine max
Glyma.15G042300 2.0kb upstream 2.0kb upstream 3730 true Chr15: 3305111-3308840 Glycine max
Glyma.15G042300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3305111-3307110 Glycine max
Glyma.15G042300 2.0kb downstream 2.0kb downstream 3730 true Chr15: 3307111-3310840 Glycine max
Glyma.15G042300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3308841-3310840 Glycine max
Glyma.15G042300 5.0kb upstream 5.0kb upstream 6730 true Chr15: 3302111-3308840 Glycine max
Glyma.15G042300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3302111-3307110 Glycine max
Glyma.15G042300 5.0kb downstream 5.0kb downstream 6730 true Chr15: 3307111-3313840 Glycine max
Glyma.15G042300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3308841-3313840 Glycine max
Glyma.15G042300 10.0kb upstream 10.0kb upstream 11730 true Chr15: 3297111-3308840 Glycine max
Glyma.15G042300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3297111-3307110 Glycine max
Glyma.15G042300 10.0kb downstream 10.0kb downstream 11730 true Chr15: 3307111-3318840 Glycine max
Glyma.15G042300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3308841-3318840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313417 5265 Fabidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.81022 0.0 24.0165    
cufflinks 16.9342 0.0 47.2444    
cufflinks 4.4043 0.0 14.6681   Low
cufflinks 10.3666 0.0 30.5253    
cufflinks 29.6559 0.0 79.6322 High High
cufflinks 21.9056 0.0 59.7437    
cufflinks 25.4446 0.0 68.8663 High  
cufflinks 12.6559 0.0 36.3836    
cufflinks 17.2327 0.0 47.9347    
cufflinks 4.762        
cufflinks 1.238       Low
cufflinks 4.646        
cufflinks 17.1     High High
cufflinks 26.524     High High
cufflinks 0.95       Low
cufflinks 4.729        
cufflinks 2.468        
cufflinks 4.749        
cufflinks 7.677     High  
cufflinks 3.078        
cufflinks 2.111        
cufflinks 3.456        
cufflinks 5.083        
cufflinks 1.217       Low
cufflinks 3.969        
cufflinks 2.906        

0 Strain