Gene : Glyma.15G043200 G. max Wm82.a2.v1
Defline:  (1 of 20) PTHR10484 - HISTONE H4 Genomic Order:  429
Name:  ? Glyma.15G043200 Secondary Identifier:  ? PAC:30497525
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Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G043200 0.5kb upstream 0.5kb upstream 10516 true Chr15: 3372833-3383348 Glycine max
Glyma.15G043200 0.5kb upstream 0.5kb upstream 500 false Chr15: 3382849-3383348 Glycine max
Glyma.15G043200 0.5kb downstream 0.5kb downstream 10516 true Chr15: 3372333-3382848 Glycine max
Glyma.15G043200 0.5kb downstream 0.5kb downstream 500 false Chr15: 3372333-3372832 Glycine max
Glyma.15G043200 1.0kb upstream 1.0kb upstream 11016 true Chr15: 3372833-3383848 Glycine max
Glyma.15G043200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3382849-3383848 Glycine max
Glyma.15G043200 1.0kb downstream 1.0kb downstream 11016 true Chr15: 3371833-3382848 Glycine max
Glyma.15G043200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3371833-3372832 Glycine max
Glyma.15G043200 2.0kb upstream 2.0kb upstream 12016 true Chr15: 3372833-3384848 Glycine max
Glyma.15G043200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3382849-3384848 Glycine max
Glyma.15G043200 2.0kb downstream 2.0kb downstream 12016 true Chr15: 3370833-3382848 Glycine max
Glyma.15G043200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3370833-3372832 Glycine max
Glyma.15G043200 5.0kb upstream 5.0kb upstream 15016 true Chr15: 3372833-3387848 Glycine max
Glyma.15G043200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3382849-3387848 Glycine max
Glyma.15G043200 5.0kb downstream 5.0kb downstream 15016 true Chr15: 3367833-3382848 Glycine max
Glyma.15G043200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3367833-3372832 Glycine max
Glyma.15G043200 10.0kb upstream 10.0kb upstream 20016 true Chr15: 3372833-3392848 Glycine max
Glyma.15G043200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3382849-3392848 Glycine max
Glyma.15G043200 10.0kb downstream 10.0kb downstream 20016 true Chr15: 3362833-3382848 Glycine max
Glyma.15G043200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3362833-3372832 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315310 5265 Fabidae View MSA
124071191 5270 Rosid View MSA
123744042 5271 Pentapetalae View MSA
122795736 5272 Eudicot View MSA
122049891 5273 Angiosperm View MSA
121350125 5274 Embryophyte View MSA
123427399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.3472 0.0 186.857 High Low
cufflinks 335.37 0.0 1768.55 High High
cufflinks 62.0049 0.0 283.662 High  
cufflinks 62.6776 0.0 286.46 High  
cufflinks 149.412 0.0 714.772 High  
cufflinks 239.656 0.0 1210.01 High High
cufflinks 85.6558 0.0 395.074 High  
cufflinks 85.3856 0.0 388.103 High  
cufflinks 156.042 0.0 777.278 High  
cufflinks 8.385     High  
cufflinks 5.235        
cufflinks 6.517        
cufflinks 14.375     High  
cufflinks 19.457     High  
cufflinks 6.516     High  
cufflinks 21.633     High High
cufflinks 4.148       Low
cufflinks 4.336       Low
cufflinks 25.023     High High
cufflinks 12.153     High  
cufflinks 5.313        
cufflinks 16.208     High  
cufflinks 41.862     High High
cufflinks 4.009       Low
cufflinks 17.331     High  
cufflinks 4.77        

0 Strain