Gene : Glyma.15G033000 G. max Wm82.a2.v1
Defline:  (1 of 5) PF07944 - Beta-L-arabinofuranosidase, GH127 (Glyco_hydro_127) Genomic Order:  330
Name:  ? Glyma.15G033000 Secondary Identifier:  ? PAC:30497085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G033000 0.5kb upstream 0.5kb upstream 7274 true Chr15: 2636819-2644092 Glycine max
Glyma.15G033000 0.5kb upstream 0.5kb upstream 500 false Chr15: 2643593-2644092 Glycine max
Glyma.15G033000 0.5kb downstream 0.5kb downstream 7274 true Chr15: 2636319-2643592 Glycine max
Glyma.15G033000 0.5kb downstream 0.5kb downstream 500 false Chr15: 2636319-2636818 Glycine max
Glyma.15G033000 1.0kb upstream 1.0kb upstream 7774 true Chr15: 2636819-2644592 Glycine max
Glyma.15G033000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2643593-2644592 Glycine max
Glyma.15G033000 1.0kb downstream 1.0kb downstream 7774 true Chr15: 2635819-2643592 Glycine max
Glyma.15G033000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2635819-2636818 Glycine max
Glyma.15G033000 2.0kb upstream 2.0kb upstream 8774 true Chr15: 2636819-2645592 Glycine max
Glyma.15G033000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2643593-2645592 Glycine max
Glyma.15G033000 2.0kb downstream 2.0kb downstream 8774 true Chr15: 2634819-2643592 Glycine max
Glyma.15G033000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2634819-2636818 Glycine max
Glyma.15G033000 5.0kb upstream 5.0kb upstream 11774 true Chr15: 2636819-2648592 Glycine max
Glyma.15G033000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2643593-2648592 Glycine max
Glyma.15G033000 5.0kb downstream 5.0kb downstream 11774 true Chr15: 2631819-2643592 Glycine max
Glyma.15G033000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2631819-2636818 Glycine max
Glyma.15G033000 10.0kb upstream 10.0kb upstream 16774 true Chr15: 2636819-2653592 Glycine max
Glyma.15G033000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2643593-2653592 Glycine max
Glyma.15G033000 10.0kb downstream 10.0kb downstream 16774 true Chr15: 2626819-2643592 Glycine max
Glyma.15G033000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2626819-2636818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255241 5265 Fabidae View MSA
123997046 5270 Rosid View MSA
123571404 5271 Pentapetalae View MSA
122606130 5272 Eudicot View MSA
122047782 5273 Angiosperm View MSA
121347713 5274 Embryophyte View MSA
123428347 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.040418 0.0 0.162854 Low Low
cufflinks 0.375456 0.0 1.70181    
cufflinks 0.898621 0.0 4.37698   High
cufflinks 0.0535253 0.0 0.212008 Low  
cufflinks 0.241785 0.0 1.20371    
cufflinks 0.0740988 0.0 0.290574 Low  
cufflinks 0.0535468 0.0 0.212292 Low  
cufflinks 0.790277 0.0 4.0223   High
cufflinks 0.19271 0.0 0.974051 Low  
cufflinks 0.073     Low High
cufflinks 0.023     Low  
cufflinks 0.063     Low High
cufflinks 0.042     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.046     Low  
cufflinks 0.135       High
cufflinks 0.004     Low Low
cufflinks 0.003     Low Low
cufflinks 0.032     Low  
cufflinks 0.009     Low  
cufflinks 0.008     Low  
cufflinks 0.03     Low  
cufflinks 0.002     Low Low
cufflinks 0.018     Low  

0 Strain