Gene : Glyma.15G033600 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG2462 - C2H2-type Zn-finger protein Genomic Order:  336
Name:  ? Glyma.15G033600 Secondary Identifier:  ? PAC:30496357
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G033600 0.5kb upstream 0.5kb upstream 2956 true Chr15: 2675618-2678573 Glycine max
Glyma.15G033600 0.5kb upstream 0.5kb upstream 500 false Chr15: 2678074-2678573 Glycine max
Glyma.15G033600 0.5kb downstream 0.5kb downstream 2956 true Chr15: 2675118-2678073 Glycine max
Glyma.15G033600 0.5kb downstream 0.5kb downstream 500 false Chr15: 2675118-2675617 Glycine max
Glyma.15G033600 1.0kb upstream 1.0kb upstream 3456 true Chr15: 2675618-2679073 Glycine max
Glyma.15G033600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2678074-2679073 Glycine max
Glyma.15G033600 1.0kb downstream 1.0kb downstream 3456 true Chr15: 2674618-2678073 Glycine max
Glyma.15G033600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2674618-2675617 Glycine max
Glyma.15G033600 2.0kb upstream 2.0kb upstream 4456 true Chr15: 2675618-2680073 Glycine max
Glyma.15G033600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2678074-2680073 Glycine max
Glyma.15G033600 2.0kb downstream 2.0kb downstream 4456 true Chr15: 2673618-2678073 Glycine max
Glyma.15G033600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2673618-2675617 Glycine max
Glyma.15G033600 5.0kb upstream 5.0kb upstream 7456 true Chr15: 2675618-2683073 Glycine max
Glyma.15G033600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2678074-2683073 Glycine max
Glyma.15G033600 5.0kb downstream 5.0kb downstream 7456 true Chr15: 2670618-2678073 Glycine max
Glyma.15G033600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2670618-2675617 Glycine max
Glyma.15G033600 10.0kb upstream 10.0kb upstream 12456 true Chr15: 2675618-2688073 Glycine max
Glyma.15G033600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2678074-2688073 Glycine max
Glyma.15G033600 10.0kb downstream 10.0kb downstream 12456 true Chr15: 2665618-2678073 Glycine max
Glyma.15G033600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2665618-2675617 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313175 5265 Fabidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139065 0.0 0.550897 Low Low
cufflinks 0.446526 0.0 1.68511    
cufflinks 0.552199 0.0 2.06034    
cufflinks 11.6185 0.0 31.893   High
cufflinks 1.60579 0.0 5.61997    
cufflinks 0.194165 0.0 0.759951 Low  
cufflinks 0.106347 0.0 0.425402 Low Low
cufflinks 4.63114 0.0 14.1046    
cufflinks 6.0952 0.0 17.9374   High
cufflinks 5.452       High
cufflinks 0.417        
cufflinks 0.52        
cufflinks 0.192       Low
cufflinks 0.069     Low Low
cufflinks 1.278        
cufflinks 1.464        
cufflinks 2.137       High
cufflinks 0.978        
cufflinks 0.089     Low Low
cufflinks 0.803        
cufflinks 0.6        
cufflinks 0.859        
cufflinks 0.47        
cufflinks 0.501        
cufflinks 1.01        
cufflinks 0.446        

0 Strain