Gene : Glyma.15G036100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22763//PTHR22763:SF40 - RING ZINC FINGER PROTEIN Genomic Order:  361
Name:  ? Glyma.15G036100 Secondary Identifier:  ? PAC:30496400
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G036100 0.5kb upstream 0.5kb upstream 2431 true Chr15: 2861611-2864041 Glycine max
Glyma.15G036100 0.5kb upstream 0.5kb upstream 500 false Chr15: 2861611-2862110 Glycine max
Glyma.15G036100 0.5kb downstream 0.5kb downstream 2431 true Chr15: 2862111-2864541 Glycine max
Glyma.15G036100 0.5kb downstream 0.5kb downstream 500 false Chr15: 2864042-2864541 Glycine max
Glyma.15G036100 1.0kb upstream 1.0kb upstream 2931 true Chr15: 2861111-2864041 Glycine max
Glyma.15G036100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2861111-2862110 Glycine max
Glyma.15G036100 1.0kb downstream 1.0kb downstream 2931 true Chr15: 2862111-2865041 Glycine max
Glyma.15G036100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2864042-2865041 Glycine max
Glyma.15G036100 2.0kb upstream 2.0kb upstream 3931 true Chr15: 2860111-2864041 Glycine max
Glyma.15G036100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2860111-2862110 Glycine max
Glyma.15G036100 2.0kb downstream 2.0kb downstream 3931 true Chr15: 2862111-2866041 Glycine max
Glyma.15G036100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2864042-2866041 Glycine max
Glyma.15G036100 5.0kb upstream 5.0kb upstream 6931 true Chr15: 2857111-2864041 Glycine max
Glyma.15G036100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2857111-2862110 Glycine max
Glyma.15G036100 5.0kb downstream 5.0kb downstream 6931 true Chr15: 2862111-2869041 Glycine max
Glyma.15G036100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2864042-2869041 Glycine max
Glyma.15G036100 10.0kb upstream 10.0kb upstream 11931 true Chr15: 2852111-2864041 Glycine max
Glyma.15G036100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2852111-2862110 Glycine max
Glyma.15G036100 10.0kb downstream 10.0kb downstream 11931 true Chr15: 2862111-2874041 Glycine max
Glyma.15G036100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2864042-2874041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296211 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.53341 0.0 15.6088    
cufflinks 2.90789 0.0 8.96004    
cufflinks 5.69594 0.0 16.1602    
cufflinks 2.41776 0.0 7.65424    
cufflinks 4.94037 0.0 14.0369    
cufflinks 8.82906 0.0 23.9472   High
cufflinks 1.06909 0.0 3.7141   Low
cufflinks 4.7089 0.0 13.5952    
cufflinks 4.42748 0.0 12.8213    
cufflinks 6.556        
cufflinks 27.771     High High
cufflinks 3.586        
cufflinks 3.524        
cufflinks 1.217       Low
cufflinks 14.06     High  
cufflinks 4.067        
cufflinks 23.737     High High
cufflinks 2.441        
cufflinks 1.993        
cufflinks 2.977        
cufflinks 20.858     High High
cufflinks 2.723        
cufflinks 2.076        
cufflinks 19.874     High High
cufflinks 2.673        
cufflinks 24.029     High High

0 Strain