Gene : Glyma.15G037200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  372
Name:  ? Glyma.15G037200 Secondary Identifier:  ? PAC:30499331
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G037200 0.5kb upstream 0.5kb upstream 2890 true Chr15: 2933806-2936695 Glycine max
Glyma.15G037200 0.5kb upstream 0.5kb upstream 500 false Chr15: 2936196-2936695 Glycine max
Glyma.15G037200 0.5kb downstream 0.5kb downstream 2890 true Chr15: 2933306-2936195 Glycine max
Glyma.15G037200 0.5kb downstream 0.5kb downstream 500 false Chr15: 2933306-2933805 Glycine max
Glyma.15G037200 1.0kb upstream 1.0kb upstream 3390 true Chr15: 2933806-2937195 Glycine max
Glyma.15G037200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2936196-2937195 Glycine max
Glyma.15G037200 1.0kb downstream 1.0kb downstream 3390 true Chr15: 2932806-2936195 Glycine max
Glyma.15G037200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2932806-2933805 Glycine max
Glyma.15G037200 2.0kb upstream 2.0kb upstream 4390 true Chr15: 2933806-2938195 Glycine max
Glyma.15G037200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2936196-2938195 Glycine max
Glyma.15G037200 2.0kb downstream 2.0kb downstream 4390 true Chr15: 2931806-2936195 Glycine max
Glyma.15G037200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2931806-2933805 Glycine max
Glyma.15G037200 5.0kb upstream 5.0kb upstream 7390 true Chr15: 2933806-2941195 Glycine max
Glyma.15G037200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2936196-2941195 Glycine max
Glyma.15G037200 5.0kb downstream 5.0kb downstream 7390 true Chr15: 2928806-2936195 Glycine max
Glyma.15G037200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2928806-2933805 Glycine max
Glyma.15G037200 10.0kb upstream 10.0kb upstream 12390 true Chr15: 2933806-2946195 Glycine max
Glyma.15G037200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2936196-2946195 Glycine max
Glyma.15G037200 10.0kb downstream 10.0kb downstream 12390 true Chr15: 2923806-2936195 Glycine max
Glyma.15G037200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2923806-2933805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032262 5273 Angiosperm View MSA
122316746 5265 Fabidae View MSA
124037144 5270 Rosid View MSA
123610216 5271 Pentapetalae View MSA
122644847 5272 Eudicot View MSA
121351918 5274 Embryophyte View MSA
123382411 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41647 0.0 5.07335    
cufflinks 2.27288 0.0 9.93674   High
cufflinks 0.773993 0.0 4.82097   Low
cufflinks 0.847821 0.0 4.90828   Low
cufflinks 1.39427 0.0 5.09034    
cufflinks 1.01407 0.0 4.07627    
cufflinks 1.11082 0.0 4.35182    
cufflinks 2.72158 0.0 12.5366   High
cufflinks 1.44188 0.0 7.02976    
cufflinks 0.565        
cufflinks 0.072       Low
cufflinks 0.45        
cufflinks 0.206        
cufflinks 0.09        
cufflinks 0.061       Low
cufflinks 1.257       High
cufflinks 0.049     Low Low
cufflinks 0.423        
cufflinks 0.907        
cufflinks 1.585       High
cufflinks 0.063       Low
cufflinks 1.311       High
cufflinks 0.464        
cufflinks 0.118        
cufflinks 1.394       High
cufflinks 0.052     Low Low

0 Strain