Gene : Glyma.15G038200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  382
Name:  ? Glyma.15G038200 Secondary Identifier:  ? PAC:30497280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G038200 0.5kb upstream 0.5kb upstream 3197 true Chr15: 3017805-3021001 Glycine max
Glyma.15G038200 0.5kb upstream 0.5kb upstream 500 false Chr15: 3017805-3018304 Glycine max
Glyma.15G038200 0.5kb downstream 0.5kb downstream 3197 true Chr15: 3018305-3021501 Glycine max
Glyma.15G038200 0.5kb downstream 0.5kb downstream 500 false Chr15: 3021002-3021501 Glycine max
Glyma.15G038200 1.0kb upstream 1.0kb upstream 3697 true Chr15: 3017305-3021001 Glycine max
Glyma.15G038200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3017305-3018304 Glycine max
Glyma.15G038200 1.0kb downstream 1.0kb downstream 3697 true Chr15: 3018305-3022001 Glycine max
Glyma.15G038200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3021002-3022001 Glycine max
Glyma.15G038200 2.0kb upstream 2.0kb upstream 4697 true Chr15: 3016305-3021001 Glycine max
Glyma.15G038200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3016305-3018304 Glycine max
Glyma.15G038200 2.0kb downstream 2.0kb downstream 4697 true Chr15: 3018305-3023001 Glycine max
Glyma.15G038200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3021002-3023001 Glycine max
Glyma.15G038200 5.0kb upstream 5.0kb upstream 7697 true Chr15: 3013305-3021001 Glycine max
Glyma.15G038200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3013305-3018304 Glycine max
Glyma.15G038200 5.0kb downstream 5.0kb downstream 7697 true Chr15: 3018305-3026001 Glycine max
Glyma.15G038200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3021002-3026001 Glycine max
Glyma.15G038200 10.0kb upstream 10.0kb upstream 12697 true Chr15: 3008305-3021001 Glycine max
Glyma.15G038200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3008305-3018304 Glycine max
Glyma.15G038200 10.0kb downstream 10.0kb downstream 12697 true Chr15: 3018305-3031001 Glycine max
Glyma.15G038200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3021002-3031001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304179 5265 Fabidae View MSA
124068444 5270 Rosid View MSA
123739321 5271 Pentapetalae View MSA
122787422 5272 Eudicot View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.4472 0.0 68.1158 High  
cufflinks 37.605 0.0 100.423 High High
cufflinks 21.0922 0.0 56.7065 High  
cufflinks 19.5063 0.0 52.7194    
cufflinks 12.0878 0.0 33.897   Low
cufflinks 17.027 0.0 46.3703    
cufflinks 12.5476 0.0 35.0937    
cufflinks 25.7383 0.0 68.8792 High  
cufflinks 10.3314 0.0 29.4447   Low
cufflinks 12.412     High  
cufflinks 4.264        
cufflinks 8.177     High  
cufflinks 2.363       Low
cufflinks 3.74        
cufflinks 1.881       Low
cufflinks 13.995     High High
cufflinks 2.323       Low
cufflinks 10.204     High  
cufflinks 11.319     High  
cufflinks 13.83     High High
cufflinks 4.354        
cufflinks 15.489     High High
cufflinks 11.455     High  
cufflinks 3.424        
cufflinks 16.985     High High
cufflinks 2.917       Low

0 Strain