Gene : Glyma.15G027700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957:SF26 - PROTEIN TBC-3, ISOFORM B Genomic Order:  277
Name:  ? Glyma.15G027700 Secondary Identifier:  ? PAC:30499322
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G027700 0.5kb upstream 0.5kb upstream 6564 true Chr15: 2215164-2221727 Glycine max
Glyma.15G027700 0.5kb upstream 0.5kb upstream 500 false Chr15: 2221228-2221727 Glycine max
Glyma.15G027700 0.5kb downstream 0.5kb downstream 6564 true Chr15: 2214664-2221227 Glycine max
Glyma.15G027700 0.5kb downstream 0.5kb downstream 500 false Chr15: 2214664-2215163 Glycine max
Glyma.15G027700 1.0kb upstream 1.0kb upstream 7064 true Chr15: 2215164-2222227 Glycine max
Glyma.15G027700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2221228-2222227 Glycine max
Glyma.15G027700 1.0kb downstream 1.0kb downstream 7064 true Chr15: 2214164-2221227 Glycine max
Glyma.15G027700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2214164-2215163 Glycine max
Glyma.15G027700 2.0kb upstream 2.0kb upstream 8064 true Chr15: 2215164-2223227 Glycine max
Glyma.15G027700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2221228-2223227 Glycine max
Glyma.15G027700 2.0kb downstream 2.0kb downstream 8064 true Chr15: 2213164-2221227 Glycine max
Glyma.15G027700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2213164-2215163 Glycine max
Glyma.15G027700 5.0kb upstream 5.0kb upstream 11064 true Chr15: 2215164-2226227 Glycine max
Glyma.15G027700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2221228-2226227 Glycine max
Glyma.15G027700 5.0kb downstream 5.0kb downstream 11064 true Chr15: 2210164-2221227 Glycine max
Glyma.15G027700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2210164-2215163 Glycine max
Glyma.15G027700 10.0kb upstream 10.0kb upstream 16064 true Chr15: 2215164-2231227 Glycine max
Glyma.15G027700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2221228-2231227 Glycine max
Glyma.15G027700 10.0kb downstream 10.0kb downstream 16064 true Chr15: 2205164-2221227 Glycine max
Glyma.15G027700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2205164-2215163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312495 5265 Fabidae View MSA
124067650 5270 Rosid View MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.33768 0.0 16.2663   Low
cufflinks 4.92267 0.0 21.0105    
cufflinks 4.1829 0.0 18.7109   Low
cufflinks 8.16285 0.0 30.233   High
cufflinks 7.1857 0.0 27.2337    
cufflinks 7.32227 0.0 27.8798    
cufflinks 6.62391 0.0 25.6407    
cufflinks 8.34094 0.0 30.6881   High
cufflinks 6.40131 0.0 25.1445    
cufflinks 1.565       High
cufflinks 0.346       Low
cufflinks 0.858        
cufflinks 1.411       High
cufflinks 1.712       High
cufflinks 0.307       Low
cufflinks 0.656        
cufflinks 0.611        
cufflinks 1.209       High
cufflinks 0.869        
cufflinks 0.592        
cufflinks 0.676        
cufflinks 0.709        
cufflinks 0.619        
cufflinks 0.544        
cufflinks 0.585        
cufflinks 0.609        

0 Strain