Gene : Glyma.15G030100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Genomic Order:  301
Name:  ? Glyma.15G030100 Secondary Identifier:  ? PAC:30497488
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G030100 0.5kb upstream 0.5kb upstream 6688 true Chr15: 2419532-2426219 Glycine max
Glyma.15G030100 0.5kb upstream 0.5kb upstream 500 false Chr15: 2419532-2420031 Glycine max
Glyma.15G030100 0.5kb downstream 0.5kb downstream 6688 true Chr15: 2420032-2426719 Glycine max
Glyma.15G030100 0.5kb downstream 0.5kb downstream 500 false Chr15: 2426220-2426719 Glycine max
Glyma.15G030100 1.0kb upstream 1.0kb upstream 7188 true Chr15: 2419032-2426219 Glycine max
Glyma.15G030100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 2419032-2420031 Glycine max
Glyma.15G030100 1.0kb downstream 1.0kb downstream 7188 true Chr15: 2420032-2427219 Glycine max
Glyma.15G030100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 2426220-2427219 Glycine max
Glyma.15G030100 2.0kb upstream 2.0kb upstream 8188 true Chr15: 2418032-2426219 Glycine max
Glyma.15G030100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 2418032-2420031 Glycine max
Glyma.15G030100 2.0kb downstream 2.0kb downstream 8188 true Chr15: 2420032-2428219 Glycine max
Glyma.15G030100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 2426220-2428219 Glycine max
Glyma.15G030100 5.0kb upstream 5.0kb upstream 11188 true Chr15: 2415032-2426219 Glycine max
Glyma.15G030100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 2415032-2420031 Glycine max
Glyma.15G030100 5.0kb downstream 5.0kb downstream 11188 true Chr15: 2420032-2431219 Glycine max
Glyma.15G030100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 2426220-2431219 Glycine max
Glyma.15G030100 10.0kb upstream 10.0kb upstream 16188 true Chr15: 2410032-2426219 Glycine max
Glyma.15G030100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 2410032-2420031 Glycine max
Glyma.15G030100 10.0kb downstream 10.0kb downstream 16188 true Chr15: 2420032-2436219 Glycine max
Glyma.15G030100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 2426220-2436219 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122301451 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83232 0.0 15.6633   Low
cufflinks 29.0545 0.0 107.153 High  
cufflinks 38.2856 0.0 140.591 High  
cufflinks 4.06338 0.0 21.2922    
cufflinks 22.4666 0.0 81.2229 High  
cufflinks 126.2 0.0 547.542 High High
cufflinks 0.709748 0.0 3.64849   Low
cufflinks 73.4378 0.0 302.156 High  
cufflinks 37.1414 0.0 135.852 High  
cufflinks 6.938       High
cufflinks 0.939        
cufflinks 1.498        
cufflinks 3.927       High
cufflinks 0.711        
cufflinks 3.791       High
cufflinks 1.376        
cufflinks 5.86       High
cufflinks 1.48        
cufflinks 3.405        
cufflinks 0.397       Low
cufflinks 1.106        
cufflinks 0.472       Low
cufflinks 0.644        
cufflinks 0.402       Low
cufflinks 0.695        
cufflinks 2.89        

0 Strain