Gene : Glyma.15G022500 G. max Wm82.a2.v1
Defline:  (1 of 5) PF01419 - Jacalin-like lectin domain (Jacalin) Genomic Order:  225
Name:  ? Glyma.15G022500 Secondary Identifier:  ? PAC:30498913
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G022500 0.5kb upstream 0.5kb upstream 5313 true Chr15: 1756375-1761687 Glycine max
Glyma.15G022500 0.5kb upstream 0.5kb upstream 500 false Chr15: 1756375-1756874 Glycine max
Glyma.15G022500 0.5kb downstream 0.5kb downstream 5313 true Chr15: 1756875-1762187 Glycine max
Glyma.15G022500 0.5kb downstream 0.5kb downstream 500 false Chr15: 1761688-1762187 Glycine max
Glyma.15G022500 1.0kb upstream 1.0kb upstream 5813 true Chr15: 1755875-1761687 Glycine max
Glyma.15G022500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1755875-1756874 Glycine max
Glyma.15G022500 1.0kb downstream 1.0kb downstream 5813 true Chr15: 1756875-1762687 Glycine max
Glyma.15G022500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1761688-1762687 Glycine max
Glyma.15G022500 2.0kb upstream 2.0kb upstream 6813 true Chr15: 1754875-1761687 Glycine max
Glyma.15G022500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1754875-1756874 Glycine max
Glyma.15G022500 2.0kb downstream 2.0kb downstream 6813 true Chr15: 1756875-1763687 Glycine max
Glyma.15G022500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1761688-1763687 Glycine max
Glyma.15G022500 5.0kb upstream 5.0kb upstream 9813 true Chr15: 1751875-1761687 Glycine max
Glyma.15G022500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1751875-1756874 Glycine max
Glyma.15G022500 5.0kb downstream 5.0kb downstream 9813 true Chr15: 1756875-1766687 Glycine max
Glyma.15G022500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1761688-1766687 Glycine max
Glyma.15G022500 10.0kb upstream 10.0kb upstream 14813 true Chr15: 1746875-1761687 Glycine max
Glyma.15G022500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1746875-1756874 Glycine max
Glyma.15G022500 10.0kb downstream 10.0kb downstream 14813 true Chr15: 1756875-1771687 Glycine max
Glyma.15G022500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1761688-1771687 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309769 5265 Fabidae View MSA
124070980 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98143 0.0 17.0549    
cufflinks 3.57353 0.0 14.6617    
cufflinks 5.72699 0.0 23.5026   High
cufflinks 3.97573 0.0 16.2649    
cufflinks 3.04504 0.0 13.6181   Low
cufflinks 4.60798 0.0 17.3909    
cufflinks 3.86164 0.0 16.5181    
cufflinks 3.6146 0.0 15.262    
cufflinks 3.79467 0.0 15.8688    
cufflinks 2.151       High
cufflinks 1.899        
cufflinks 1.996       High
cufflinks 1.388        
cufflinks 1.02        
cufflinks 1.329        
cufflinks 0.736       Low
cufflinks 1.591        
cufflinks 1.666        
cufflinks 1.148        
cufflinks 0.909       Low
cufflinks 1.934        
cufflinks 0.961       Low
cufflinks 1.265        
cufflinks 1.924        
cufflinks 0.872       Low
cufflinks 2.118       High

0 Strain