Gene : Glyma.15G067800 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  678
Name:  ? Glyma.15G067800 Secondary Identifier:  ? PAC:30498640
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5129 Glycine max pathologic  
Gmax PWY-6483 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G067800 0.5kb upstream 0.5kb upstream 5546 true Chr15: 5168884-5174429 Glycine max
Glyma.15G067800 0.5kb upstream 0.5kb upstream 500 false Chr15: 5168884-5169383 Glycine max
Glyma.15G067800 0.5kb downstream 0.5kb downstream 5546 true Chr15: 5169384-5174929 Glycine max
Glyma.15G067800 0.5kb downstream 0.5kb downstream 500 false Chr15: 5174430-5174929 Glycine max
Glyma.15G067800 1.0kb upstream 1.0kb upstream 6046 true Chr15: 5168384-5174429 Glycine max
Glyma.15G067800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5168384-5169383 Glycine max
Glyma.15G067800 1.0kb downstream 1.0kb downstream 6046 true Chr15: 5169384-5175429 Glycine max
Glyma.15G067800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5174430-5175429 Glycine max
Glyma.15G067800 2.0kb upstream 2.0kb upstream 7046 true Chr15: 5167384-5174429 Glycine max
Glyma.15G067800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5167384-5169383 Glycine max
Glyma.15G067800 2.0kb downstream 2.0kb downstream 7046 true Chr15: 5169384-5176429 Glycine max
Glyma.15G067800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5174430-5176429 Glycine max
Glyma.15G067800 5.0kb upstream 5.0kb upstream 10046 true Chr15: 5164384-5174429 Glycine max
Glyma.15G067800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5164384-5169383 Glycine max
Glyma.15G067800 5.0kb downstream 5.0kb downstream 10046 true Chr15: 5169384-5179429 Glycine max
Glyma.15G067800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5174430-5179429 Glycine max
Glyma.15G067800 10.0kb upstream 10.0kb upstream 15046 true Chr15: 5159384-5174429 Glycine max
Glyma.15G067800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5159384-5169383 Glycine max
Glyma.15G067800 10.0kb downstream 10.0kb downstream 15046 true Chr15: 5169384-5184429 Glycine max
Glyma.15G067800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5174430-5184429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314274 5265 Fabidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2087 0.0 48.5923   High
cufflinks 7.56559 0.0 20.8806   Low
cufflinks 26.2415 0.0 70.6901 High High
cufflinks 11.5022 0.0 30.934    
cufflinks 9.51002 0.0 25.7881    
cufflinks 9.06244 0.0 24.6407    
cufflinks 14.2727 0.0 38.1363    
cufflinks 11.4725 0.0 30.8533    
cufflinks 8.21213 0.0 22.4875    
cufflinks 3.627        
cufflinks 10.187     High High
cufflinks 5.467        
cufflinks 4.984        
cufflinks 6.674     High  
cufflinks 9.104     High High
cufflinks 3.992        
cufflinks 3.841        
cufflinks 4.161        
cufflinks 3.214       Low
cufflinks 5.007        
cufflinks 8.724     High High
cufflinks 4.375        
cufflinks 2.898       Low
cufflinks 8.431     High High
cufflinks 4.492        
cufflinks 5.048        

0 Strain