Gene : Glyma.15G055700 G. max Wm82.a2.v1
Defline:  (1 of 7) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  557
Name:  ? Glyma.15G055700 Secondary Identifier:  ? PAC:30496516
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax RIBOSYN2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G055700 0.5kb upstream 0.5kb upstream 6171 true Chr15: 4356083-4362253 Glycine max
Glyma.15G055700 0.5kb upstream 0.5kb upstream 500 false Chr15: 4356083-4356582 Glycine max
Glyma.15G055700 0.5kb downstream 0.5kb downstream 6171 true Chr15: 4356583-4362753 Glycine max
Glyma.15G055700 0.5kb downstream 0.5kb downstream 500 false Chr15: 4362254-4362753 Glycine max
Glyma.15G055700 1.0kb upstream 1.0kb upstream 6671 true Chr15: 4355583-4362253 Glycine max
Glyma.15G055700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4355583-4356582 Glycine max
Glyma.15G055700 1.0kb downstream 1.0kb downstream 6671 true Chr15: 4356583-4363253 Glycine max
Glyma.15G055700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4362254-4363253 Glycine max
Glyma.15G055700 2.0kb upstream 2.0kb upstream 7671 true Chr15: 4354583-4362253 Glycine max
Glyma.15G055700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4354583-4356582 Glycine max
Glyma.15G055700 2.0kb downstream 2.0kb downstream 7671 true Chr15: 4356583-4364253 Glycine max
Glyma.15G055700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4362254-4364253 Glycine max
Glyma.15G055700 5.0kb upstream 5.0kb upstream 10671 true Chr15: 4351583-4362253 Glycine max
Glyma.15G055700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4351583-4356582 Glycine max
Glyma.15G055700 5.0kb downstream 5.0kb downstream 10671 true Chr15: 4356583-4367253 Glycine max
Glyma.15G055700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4362254-4367253 Glycine max
Glyma.15G055700 10.0kb upstream 10.0kb upstream 15671 true Chr15: 4346583-4362253 Glycine max
Glyma.15G055700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4346583-4356582 Glycine max
Glyma.15G055700 10.0kb downstream 10.0kb downstream 15671 true Chr15: 4356583-4372253 Glycine max
Glyma.15G055700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4362254-4372253 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91092 0.0 13.7809   High
cufflinks 0.562923 0.0 2.03215   Low
cufflinks 1.60586 0.0 5.20768    
cufflinks 0.575181 0.0 2.07218   Low
cufflinks 3.42929 0.0 10.0543    
cufflinks 7.48707 0.0 20.3222   High
cufflinks 1.42436 0.0 4.72474    
cufflinks 0.726219 0.0 2.57425    
cufflinks 2.76486 0.0 8.34282    
cufflinks 2.201        
cufflinks 35.438     High High
cufflinks 0.805        
cufflinks 4.69        
cufflinks 2.97        
cufflinks 19.109     High  
cufflinks 0.464        
cufflinks 36.162     High High
cufflinks 0.425        
cufflinks 0.257       Low
cufflinks 0.275       Low
cufflinks 34.493     High High
cufflinks 0.61        
cufflinks 0.25       Low
cufflinks 21.75     High High
cufflinks 0.34        
cufflinks 49.717     High High

0 Strain