Gene : Glyma.15G056500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  565
Name:  ? Glyma.15G056500 Secondary Identifier:  ? PAC:30497051
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G056500 0.5kb upstream 0.5kb upstream 4469 true Chr15: 4396504-4400972 Glycine max
Glyma.15G056500 0.5kb upstream 0.5kb upstream 500 false Chr15: 4396504-4397003 Glycine max
Glyma.15G056500 0.5kb downstream 0.5kb downstream 4469 true Chr15: 4397004-4401472 Glycine max
Glyma.15G056500 0.5kb downstream 0.5kb downstream 500 false Chr15: 4400973-4401472 Glycine max
Glyma.15G056500 1.0kb upstream 1.0kb upstream 4969 true Chr15: 4396004-4400972 Glycine max
Glyma.15G056500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4396004-4397003 Glycine max
Glyma.15G056500 1.0kb downstream 1.0kb downstream 4969 true Chr15: 4397004-4401972 Glycine max
Glyma.15G056500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4400973-4401972 Glycine max
Glyma.15G056500 2.0kb upstream 2.0kb upstream 5969 true Chr15: 4395004-4400972 Glycine max
Glyma.15G056500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4395004-4397003 Glycine max
Glyma.15G056500 2.0kb downstream 2.0kb downstream 5969 true Chr15: 4397004-4402972 Glycine max
Glyma.15G056500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4400973-4402972 Glycine max
Glyma.15G056500 5.0kb upstream 5.0kb upstream 8969 true Chr15: 4392004-4400972 Glycine max
Glyma.15G056500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4392004-4397003 Glycine max
Glyma.15G056500 5.0kb downstream 5.0kb downstream 8969 true Chr15: 4397004-4405972 Glycine max
Glyma.15G056500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4400973-4405972 Glycine max
Glyma.15G056500 10.0kb upstream 10.0kb upstream 13969 true Chr15: 4387004-4400972 Glycine max
Glyma.15G056500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4387004-4397003 Glycine max
Glyma.15G056500 10.0kb downstream 10.0kb downstream 13969 true Chr15: 4397004-4410972 Glycine max
Glyma.15G056500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4400973-4410972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296483 5265 Fabidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49542 0.0 14.9288    
cufflinks 1.93267 0.0 5.87372    
cufflinks 2.20207 0.0 6.54036    
cufflinks 4.49622 0.0 12.3688    
cufflinks 2.59759 0.0 7.59604    
cufflinks 0.506946 0.0 1.80475   Low
cufflinks 0.981664 0.0 3.28592    
cufflinks 11.8671 0.0 31.7229   High
cufflinks 1.62431 0.0 5.05877    
cufflinks 5.2       High
cufflinks 0.206       Low
cufflinks 2.572        
cufflinks 0.991        
cufflinks 1.072        
cufflinks 0.095       Low
cufflinks 3.867        
cufflinks 0.48        
cufflinks 7.116       High
cufflinks 1.213        
cufflinks 5.12        
cufflinks 0.196       Low
cufflinks 5.331       High
cufflinks 3.12        
cufflinks 0.149       Low
cufflinks 4.86        
cufflinks 0.129       Low

0 Strain