Gene : Glyma.15G056600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Genomic Order:  566
Name:  ? Glyma.15G056600 Secondary Identifier:  ? PAC:30499148
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G056600 0.5kb upstream 0.5kb upstream 4252 true Chr15: 4404973-4409224 Glycine max
Glyma.15G056600 0.5kb upstream 0.5kb upstream 500 false Chr15: 4408725-4409224 Glycine max
Glyma.15G056600 0.5kb downstream 0.5kb downstream 4252 true Chr15: 4404473-4408724 Glycine max
Glyma.15G056600 0.5kb downstream 0.5kb downstream 500 false Chr15: 4404473-4404972 Glycine max
Glyma.15G056600 1.0kb upstream 1.0kb upstream 4752 true Chr15: 4404973-4409724 Glycine max
Glyma.15G056600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4408725-4409724 Glycine max
Glyma.15G056600 1.0kb downstream 1.0kb downstream 4752 true Chr15: 4403973-4408724 Glycine max
Glyma.15G056600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4403973-4404972 Glycine max
Glyma.15G056600 2.0kb upstream 2.0kb upstream 5752 true Chr15: 4404973-4410724 Glycine max
Glyma.15G056600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4408725-4410724 Glycine max
Glyma.15G056600 2.0kb downstream 2.0kb downstream 5752 true Chr15: 4402973-4408724 Glycine max
Glyma.15G056600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4402973-4404972 Glycine max
Glyma.15G056600 5.0kb upstream 5.0kb upstream 8752 true Chr15: 4404973-4413724 Glycine max
Glyma.15G056600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4408725-4413724 Glycine max
Glyma.15G056600 5.0kb downstream 5.0kb downstream 8752 true Chr15: 4399973-4408724 Glycine max
Glyma.15G056600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4399973-4404972 Glycine max
Glyma.15G056600 10.0kb upstream 10.0kb upstream 13752 true Chr15: 4404973-4418724 Glycine max
Glyma.15G056600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4408725-4418724 Glycine max
Glyma.15G056600 10.0kb downstream 10.0kb downstream 13752 true Chr15: 4394973-4408724 Glycine max
Glyma.15G056600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4394973-4404972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304524 5265 Fabidae View MSA
124065571 5270 Rosid View MSA
123750952 5271 Pentapetalae View MSA
122794096 5272 Eudicot View MSA
122042740 5273 Angiosperm View MSA
121310013 5274 Embryophyte View MSA
123347619 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3856 0.0 39.7399    
cufflinks 8.06295 0.0 24.5437    
cufflinks 12.8269 0.0 38.1549    
cufflinks 33.7086 0.0 113.867 High High
cufflinks 12.9407 0.0 38.5207    
cufflinks 9.22593 0.0 27.7647    
cufflinks 6.6448 0.0 20.6656   Low
cufflinks 60.7876 0.0 192.247 High High
cufflinks 13.3959 0.0 39.721    
cufflinks 19.567     High High
cufflinks 6.185     High  
cufflinks 9.713     High  
cufflinks 11.35     High High
cufflinks 5.204        
cufflinks 3.953       Low
cufflinks 4.779        
cufflinks 13.434     High High
cufflinks 7.036        
cufflinks 7.165        
cufflinks 5.167        
cufflinks 7.198     High  
cufflinks 6.963        
cufflinks 4.875        
cufflinks 8.057     High  
cufflinks 5.495        
cufflinks 6.814     High  

0 Strain