Gene : Glyma.15G057900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  579
Name:  ? Glyma.15G057900 Secondary Identifier:  ? PAC:30498573
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G057900 0.5kb upstream 0.5kb upstream 7524 true Chr15: 4472453-4479976 Glycine max
Glyma.15G057900 0.5kb upstream 0.5kb upstream 500 false Chr15: 4472453-4472952 Glycine max
Glyma.15G057900 0.5kb downstream 0.5kb downstream 7524 true Chr15: 4472953-4480476 Glycine max
Glyma.15G057900 0.5kb downstream 0.5kb downstream 500 false Chr15: 4479977-4480476 Glycine max
Glyma.15G057900 1.0kb upstream 1.0kb upstream 8024 true Chr15: 4471953-4479976 Glycine max
Glyma.15G057900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4471953-4472952 Glycine max
Glyma.15G057900 1.0kb downstream 1.0kb downstream 8024 true Chr15: 4472953-4480976 Glycine max
Glyma.15G057900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4479977-4480976 Glycine max
Glyma.15G057900 2.0kb upstream 2.0kb upstream 9024 true Chr15: 4470953-4479976 Glycine max
Glyma.15G057900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4470953-4472952 Glycine max
Glyma.15G057900 2.0kb downstream 2.0kb downstream 9024 true Chr15: 4472953-4481976 Glycine max
Glyma.15G057900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4479977-4481976 Glycine max
Glyma.15G057900 5.0kb upstream 5.0kb upstream 12024 true Chr15: 4467953-4479976 Glycine max
Glyma.15G057900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4467953-4472952 Glycine max
Glyma.15G057900 5.0kb downstream 5.0kb downstream 12024 true Chr15: 4472953-4484976 Glycine max
Glyma.15G057900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4479977-4484976 Glycine max
Glyma.15G057900 10.0kb upstream 10.0kb upstream 17024 true Chr15: 4462953-4479976 Glycine max
Glyma.15G057900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4462953-4472952 Glycine max
Glyma.15G057900 10.0kb downstream 10.0kb downstream 17024 true Chr15: 4472953-4489976 Glycine max
Glyma.15G057900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4479977-4489976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784820 5273 Angiosperm View MSA
122253897 5265 Fabidae View MSA
124042573 5270 Rosid View MSA
123756985 5271 Pentapetalae View MSA
122778072 5272 Eudicot View MSA
121056225 5274 Embryophyte View MSA
123096141 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166084 0.0 0.662317 Low  
cufflinks 1.74585 0.0 7.62263    
cufflinks 12.9212 0.0 60.5329   High
cufflinks 5.57723 0.0 30.0359   High
cufflinks 0.0187431 0.0 0.100418 Low Low
cufflinks 0.124176 0.0 0.50141 Low  
cufflinks 0.0394112 0.0 0.178741 Low  
cufflinks 0.871678 0.0 4.12927    
cufflinks 0.0217698 0.0 0.112101 Low Low
cufflinks 0.039     Low  
cufflinks 0.003     Low Low
cufflinks 0.091     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.062     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.247       High
cufflinks 0.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.125        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.124        
cufflinks 0.001     Low Low

0 Strain