Gene : Glyma.15G058300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF264 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  583
Name:  ? Glyma.15G058300 Secondary Identifier:  ? PAC:30496388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G058300 0.5kb upstream 0.5kb upstream 5494 true Chr15: 4507281-4512774 Glycine max
Glyma.15G058300 0.5kb upstream 0.5kb upstream 500 false Chr15: 4512275-4512774 Glycine max
Glyma.15G058300 0.5kb downstream 0.5kb downstream 5494 true Chr15: 4506781-4512274 Glycine max
Glyma.15G058300 0.5kb downstream 0.5kb downstream 500 false Chr15: 4506781-4507280 Glycine max
Glyma.15G058300 1.0kb upstream 1.0kb upstream 5994 true Chr15: 4507281-4513274 Glycine max
Glyma.15G058300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4512275-4513274 Glycine max
Glyma.15G058300 1.0kb downstream 1.0kb downstream 5994 true Chr15: 4506281-4512274 Glycine max
Glyma.15G058300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4506281-4507280 Glycine max
Glyma.15G058300 2.0kb upstream 2.0kb upstream 6994 true Chr15: 4507281-4514274 Glycine max
Glyma.15G058300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4512275-4514274 Glycine max
Glyma.15G058300 2.0kb downstream 2.0kb downstream 6994 true Chr15: 4505281-4512274 Glycine max
Glyma.15G058300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4505281-4507280 Glycine max
Glyma.15G058300 5.0kb upstream 5.0kb upstream 9994 true Chr15: 4507281-4517274 Glycine max
Glyma.15G058300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4512275-4517274 Glycine max
Glyma.15G058300 5.0kb downstream 5.0kb downstream 9994 true Chr15: 4502281-4512274 Glycine max
Glyma.15G058300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4502281-4507280 Glycine max
Glyma.15G058300 10.0kb upstream 10.0kb upstream 14994 true Chr15: 4507281-4522274 Glycine max
Glyma.15G058300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4512275-4522274 Glycine max
Glyma.15G058300 10.0kb downstream 10.0kb downstream 14994 true Chr15: 4497281-4512274 Glycine max
Glyma.15G058300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4497281-4507280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041045 5273 Angiosperm View MSA
122307170 5265 Fabidae View MSA
124073279 5270 Rosid View MSA
123750946 5271 Pentapetalae View MSA
122787663 5272 Eudicot View MSA
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00950965 0.0 0.0428703 Low Low
cufflinks 0.770041 0.0 2.81275    
cufflinks 0.149358 0.0 0.741999 Low  
cufflinks 0.287683 0.0 1.29832    
cufflinks 0.487753 0.0 2.02389    
cufflinks 0.735123 0.0 2.6802    
cufflinks 0.359153 0.0 1.56824    
cufflinks 0.314101 0.0 1.3911    
cufflinks 0.717524 0.0 3.46878    
cufflinks 0.276        
cufflinks 0.112        
cufflinks 0.268        
cufflinks 0.833        
cufflinks 0.748        
cufflinks 0.021     Low Low
cufflinks 0.862        
cufflinks 0.063     Low Low
cufflinks 0.172        
cufflinks 0.49        
cufflinks 0.665        
cufflinks 0.11        
cufflinks 0.822        
cufflinks 1.055       High
cufflinks 0.212        
cufflinks 0.633        
cufflinks 0.186        

0 Strain