Gene : Glyma.15G060100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13213 - DNA POLYMERASE V RELATED Genomic Order:  601
Name:  ? Glyma.15G060100 Secondary Identifier:  ? PAC:30498956
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G060100 0.5kb upstream 0.5kb upstream 8017 true Chr15: 4645226-4653242 Glycine max
Glyma.15G060100 0.5kb upstream 0.5kb upstream 500 false Chr15: 4645226-4645725 Glycine max
Glyma.15G060100 0.5kb downstream 0.5kb downstream 8017 true Chr15: 4645726-4653742 Glycine max
Glyma.15G060100 0.5kb downstream 0.5kb downstream 500 false Chr15: 4653243-4653742 Glycine max
Glyma.15G060100 1.0kb upstream 1.0kb upstream 8517 true Chr15: 4644726-4653242 Glycine max
Glyma.15G060100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4644726-4645725 Glycine max
Glyma.15G060100 1.0kb downstream 1.0kb downstream 8517 true Chr15: 4645726-4654242 Glycine max
Glyma.15G060100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4653243-4654242 Glycine max
Glyma.15G060100 2.0kb upstream 2.0kb upstream 9517 true Chr15: 4643726-4653242 Glycine max
Glyma.15G060100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4643726-4645725 Glycine max
Glyma.15G060100 2.0kb downstream 2.0kb downstream 9517 true Chr15: 4645726-4655242 Glycine max
Glyma.15G060100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4653243-4655242 Glycine max
Glyma.15G060100 5.0kb upstream 5.0kb upstream 12517 true Chr15: 4640726-4653242 Glycine max
Glyma.15G060100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4640726-4645725 Glycine max
Glyma.15G060100 5.0kb downstream 5.0kb downstream 12517 true Chr15: 4645726-4658242 Glycine max
Glyma.15G060100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4653243-4658242 Glycine max
Glyma.15G060100 10.0kb upstream 10.0kb upstream 17517 true Chr15: 4635726-4653242 Glycine max
Glyma.15G060100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4635726-4645725 Glycine max
Glyma.15G060100 10.0kb downstream 10.0kb downstream 17517 true Chr15: 4645726-4663242 Glycine max
Glyma.15G060100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4653243-4663242 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305565 5265 Fabidae View MSA
124065386 5270 Rosid View MSA
123737310 5271 Pentapetalae View MSA
122790148 5272 Eudicot View MSA
122044818 5273 Angiosperm View MSA
121344335 5274 Embryophyte View MSA
123424948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.91965 0.0 23.8997    
cufflinks 6.09082 0.0 16.2556    
cufflinks 4.43547 0.0 11.9241    
cufflinks 4.69294 0.0 12.5941    
cufflinks 7.34373 0.0 19.6008    
cufflinks 2.9652 0.0 8.1718   Low
cufflinks 15.9662 0.0 44.3051   High
cufflinks 5.7453 0.0 15.3417    
cufflinks 6.4258 0.0 17.144    
cufflinks 2.539        
cufflinks 0.662       Low
cufflinks 4.173        
cufflinks 5.283       High
cufflinks 7.095     High High
cufflinks 2.585        
cufflinks 2.85        
cufflinks 1.792        
cufflinks 3.561        
cufflinks 4.969       High
cufflinks 2.272        
cufflinks 1.481        
cufflinks 2.39        
cufflinks 3.644        
cufflinks 0.981       Low
cufflinks 2.486        
cufflinks 1.821        

0 Strain