Gene : Glyma.15G060600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31066:SF2 - GB Genomic Order:  606
Name:  ? Glyma.15G060600 Secondary Identifier:  ? PAC:30498259
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G060600 0.5kb upstream 0.5kb upstream 4006 true Chr15: 4681846-4685851 Glycine max
Glyma.15G060600 0.5kb upstream 0.5kb upstream 500 false Chr15: 4685352-4685851 Glycine max
Glyma.15G060600 0.5kb downstream 0.5kb downstream 4006 true Chr15: 4681346-4685351 Glycine max
Glyma.15G060600 0.5kb downstream 0.5kb downstream 500 false Chr15: 4681346-4681845 Glycine max
Glyma.15G060600 1.0kb upstream 1.0kb upstream 4506 true Chr15: 4681846-4686351 Glycine max
Glyma.15G060600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4685352-4686351 Glycine max
Glyma.15G060600 1.0kb downstream 1.0kb downstream 4506 true Chr15: 4680846-4685351 Glycine max
Glyma.15G060600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4680846-4681845 Glycine max
Glyma.15G060600 2.0kb upstream 2.0kb upstream 5506 true Chr15: 4681846-4687351 Glycine max
Glyma.15G060600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4685352-4687351 Glycine max
Glyma.15G060600 2.0kb downstream 2.0kb downstream 5506 true Chr15: 4679846-4685351 Glycine max
Glyma.15G060600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4679846-4681845 Glycine max
Glyma.15G060600 5.0kb upstream 5.0kb upstream 8506 true Chr15: 4681846-4690351 Glycine max
Glyma.15G060600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4685352-4690351 Glycine max
Glyma.15G060600 5.0kb downstream 5.0kb downstream 8506 true Chr15: 4676846-4685351 Glycine max
Glyma.15G060600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4676846-4681845 Glycine max
Glyma.15G060600 10.0kb upstream 10.0kb upstream 13506 true Chr15: 4681846-4695351 Glycine max
Glyma.15G060600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4685352-4695351 Glycine max
Glyma.15G060600 10.0kb downstream 10.0kb downstream 13506 true Chr15: 4671846-4685351 Glycine max
Glyma.15G060600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4671846-4681845 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311739 5265 Fabidae View MSA
124072365 5270 Rosid View MSA
123740761 5271 Pentapetalae View MSA
122794728 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.92269 0.0 31.0418    
cufflinks 7.09301 0.0 27.3608    
cufflinks 9.42284 0.0 30.3074    
cufflinks 4.56035 0.0 17.1747   Low
cufflinks 16.9215 0.0 50.361   High
cufflinks 13.4972 0.0 40.7561    
cufflinks 3.68134 0.0 11.4084   Low
cufflinks 11.2091 0.0 34.7043    
cufflinks 13.8732 0.0 41.8021    
cufflinks 0.958        
cufflinks 2.754        
cufflinks 1.449        
cufflinks 0.61       Low
cufflinks 0.291       Low
cufflinks 0.608       Low
cufflinks 1.924        
cufflinks 1.817        
cufflinks 1.515        
cufflinks 1.118        
cufflinks 2.996       High
cufflinks 1.79        
cufflinks 2.479        
cufflinks 1.105        
cufflinks 4.077       High
cufflinks 2.207        
cufflinks 2.442        

0 Strain