Gene : Glyma.15G061800 G. max Wm82.a2.v1
Defline:  (1 of 8) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  618
Name:  ? Glyma.15G061800 Secondary Identifier:  ? PAC:30499207
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  
Gmax PWY-5670 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G061800 0.5kb upstream 0.5kb upstream 4317 true Chr15: 4763789-4768105 Glycine max
Glyma.15G061800 0.5kb upstream 0.5kb upstream 500 false Chr15: 4763789-4764288 Glycine max
Glyma.15G061800 0.5kb downstream 0.5kb downstream 4317 true Chr15: 4764289-4768605 Glycine max
Glyma.15G061800 0.5kb downstream 0.5kb downstream 500 false Chr15: 4768106-4768605 Glycine max
Glyma.15G061800 1.0kb upstream 1.0kb upstream 4817 true Chr15: 4763289-4768105 Glycine max
Glyma.15G061800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4763289-4764288 Glycine max
Glyma.15G061800 1.0kb downstream 1.0kb downstream 4817 true Chr15: 4764289-4769105 Glycine max
Glyma.15G061800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4768106-4769105 Glycine max
Glyma.15G061800 2.0kb upstream 2.0kb upstream 5817 true Chr15: 4762289-4768105 Glycine max
Glyma.15G061800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4762289-4764288 Glycine max
Glyma.15G061800 2.0kb downstream 2.0kb downstream 5817 true Chr15: 4764289-4770105 Glycine max
Glyma.15G061800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4768106-4770105 Glycine max
Glyma.15G061800 5.0kb upstream 5.0kb upstream 8817 true Chr15: 4759289-4768105 Glycine max
Glyma.15G061800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4759289-4764288 Glycine max
Glyma.15G061800 5.0kb downstream 5.0kb downstream 8817 true Chr15: 4764289-4773105 Glycine max
Glyma.15G061800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4768106-4773105 Glycine max
Glyma.15G061800 10.0kb upstream 10.0kb upstream 13817 true Chr15: 4754289-4768105 Glycine max
Glyma.15G061800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4754289-4764288 Glycine max
Glyma.15G061800 10.0kb downstream 10.0kb downstream 13817 true Chr15: 4764289-4778105 Glycine max
Glyma.15G061800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4768106-4778105 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309220 5265 Fabidae View MSA
124051679 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7196 0.0 49.9781   High
cufflinks 11.9844 0.0 32.1509    
cufflinks 5.30621 0.0 15.0571    
cufflinks 8.00326 0.0 21.9155    
cufflinks 1.13638 0.0 3.94856    
cufflinks 3.65487 0.0 10.8903    
cufflinks 5.53619 0.0 15.6913    
cufflinks 3.6066 0.0 10.7707    
cufflinks 0.11176 0.0 0.439236 Low Low
cufflinks 2.114        
cufflinks 0.625        
cufflinks 6.006        
cufflinks 0.022     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.108       Low
cufflinks 9.029     High  
cufflinks 0.462        
cufflinks 12.15     High  
cufflinks 7.593     High  
cufflinks 10.258     High  
cufflinks 0.163       Low
cufflinks 10.489     High  
cufflinks 14.177     High High
cufflinks 0.428        
cufflinks 10.979     High  
cufflinks 0.121       Low

0 Strain