Gene : Glyma.15G051700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10971//PTHR10971:SF16 - MRNA EXPORT FACTOR AND BUB3 Genomic Order:  517
Name:  ? Glyma.15G051700 Secondary Identifier:  ? PAC:30496552
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G051700 0.5kb upstream 0.5kb upstream 5813 true Chr15: 4075068-4080880 Glycine max
Glyma.15G051700 0.5kb upstream 0.5kb upstream 500 false Chr15: 4080381-4080880 Glycine max
Glyma.15G051700 0.5kb downstream 0.5kb downstream 5813 true Chr15: 4074568-4080380 Glycine max
Glyma.15G051700 0.5kb downstream 0.5kb downstream 500 false Chr15: 4074568-4075067 Glycine max
Glyma.15G051700 1.0kb upstream 1.0kb upstream 6313 true Chr15: 4075068-4081380 Glycine max
Glyma.15G051700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4080381-4081380 Glycine max
Glyma.15G051700 1.0kb downstream 1.0kb downstream 6313 true Chr15: 4074068-4080380 Glycine max
Glyma.15G051700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4074068-4075067 Glycine max
Glyma.15G051700 2.0kb upstream 2.0kb upstream 7313 true Chr15: 4075068-4082380 Glycine max
Glyma.15G051700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4080381-4082380 Glycine max
Glyma.15G051700 2.0kb downstream 2.0kb downstream 7313 true Chr15: 4073068-4080380 Glycine max
Glyma.15G051700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4073068-4075067 Glycine max
Glyma.15G051700 5.0kb upstream 5.0kb upstream 10313 true Chr15: 4075068-4085380 Glycine max
Glyma.15G051700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4080381-4085380 Glycine max
Glyma.15G051700 5.0kb downstream 5.0kb downstream 10313 true Chr15: 4070068-4080380 Glycine max
Glyma.15G051700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4070068-4075067 Glycine max
Glyma.15G051700 10.0kb upstream 10.0kb upstream 15313 true Chr15: 4075068-4090380 Glycine max
Glyma.15G051700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4080381-4090380 Glycine max
Glyma.15G051700 10.0kb downstream 10.0kb downstream 15313 true Chr15: 4065068-4080380 Glycine max
Glyma.15G051700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4065068-4075067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302541 5265 Fabidae View MSA
124073697 5270 Rosid View MSA
123740132 5271 Pentapetalae View MSA
122786172 5272 Eudicot View MSA
122042372 5273 Angiosperm View MSA
121348493 5274 Embryophyte View MSA
123423920 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.1331 0.0 67.163 High High
cufflinks 18.5449 0.0 49.5059    
cufflinks 19.5361 0.0 52.1221    
cufflinks 19.4823 0.0 51.9863    
cufflinks 17.5316 0.0 46.8562    
cufflinks 19.7162 0.0 52.6113    
cufflinks 16.7322 0.0 44.7514   Low
cufflinks 18.6086 0.0 49.6689    
cufflinks 30.5543 0.0 82.1787 High High
cufflinks 3.418       Low
cufflinks 5.99     High  
cufflinks 12.117     High High
cufflinks 4.255        
cufflinks 3.371       Low
cufflinks 8.749     High High
cufflinks 5.208        
cufflinks 4.557        
cufflinks 12.982     High High
cufflinks 7.848     High  
cufflinks 4.819        
cufflinks 3.966        
cufflinks 5.713        
cufflinks 5.461        
cufflinks 3.754        
cufflinks 5.055        
cufflinks 4.062        

0 Strain