Gene : Glyma.15G052300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12320:SF9 - PROTEIN PHOSPHATASE 2C 62-RELATED Genomic Order:  523
Name:  ? Glyma.15G052300 Secondary Identifier:  ? PAC:30499957
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G052300 0.5kb upstream 0.5kb upstream 6599 true Chr15: 4125248-4131846 Glycine max
Glyma.15G052300 0.5kb upstream 0.5kb upstream 500 false Chr15: 4131347-4131846 Glycine max
Glyma.15G052300 0.5kb downstream 0.5kb downstream 6599 true Chr15: 4124748-4131346 Glycine max
Glyma.15G052300 0.5kb downstream 0.5kb downstream 500 false Chr15: 4124748-4125247 Glycine max
Glyma.15G052300 1.0kb upstream 1.0kb upstream 7099 true Chr15: 4125248-4132346 Glycine max
Glyma.15G052300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4131347-4132346 Glycine max
Glyma.15G052300 1.0kb downstream 1.0kb downstream 7099 true Chr15: 4124248-4131346 Glycine max
Glyma.15G052300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4124248-4125247 Glycine max
Glyma.15G052300 2.0kb upstream 2.0kb upstream 8099 true Chr15: 4125248-4133346 Glycine max
Glyma.15G052300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4131347-4133346 Glycine max
Glyma.15G052300 2.0kb downstream 2.0kb downstream 8099 true Chr15: 4123248-4131346 Glycine max
Glyma.15G052300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4123248-4125247 Glycine max
Glyma.15G052300 5.0kb upstream 5.0kb upstream 11099 true Chr15: 4125248-4136346 Glycine max
Glyma.15G052300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4131347-4136346 Glycine max
Glyma.15G052300 5.0kb downstream 5.0kb downstream 11099 true Chr15: 4120248-4131346 Glycine max
Glyma.15G052300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4120248-4125247 Glycine max
Glyma.15G052300 10.0kb upstream 10.0kb upstream 16099 true Chr15: 4125248-4141346 Glycine max
Glyma.15G052300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4131347-4141346 Glycine max
Glyma.15G052300 10.0kb downstream 10.0kb downstream 16099 true Chr15: 4115248-4131346 Glycine max
Glyma.15G052300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4115248-4125247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314256 5265 Fabidae View MSA
124063620 5270 Rosid View MSA
123740753 5271 Pentapetalae View MSA
122796169 5272 Eudicot View MSA
122049301 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5171 0.0 42.9484   High
cufflinks 9.65267 0.0 33.0144   High
cufflinks 3.99115 0.0 13.0618    
cufflinks 6.78669 0.0 23.7504    
cufflinks 2.4618 0.0 9.25981    
cufflinks 1.35652 0.0 6.12427   Low
cufflinks 6.13533 0.0 21.8052    
cufflinks 4.82262 0.0 17.6455    
cufflinks 2.69539 0.0 9.80648    
cufflinks 1.918        
cufflinks 0.115       Low
cufflinks 2.389        
cufflinks 0.533        
cufflinks 0.556        
cufflinks 0.299        
cufflinks 5.171        
cufflinks 0.145       Low
cufflinks 3.272        
cufflinks 3.099        
cufflinks 6.394       High
cufflinks 0.104       Low
cufflinks 6.549       High
cufflinks 5.194        
cufflinks 0.062       Low
cufflinks 6.443       High
cufflinks 0.185        

0 Strain