Gene : Glyma.15G053900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10992:SF742 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  539
Name:  ? Glyma.15G053900 Secondary Identifier:  ? PAC:30495929
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  
Gmax PWY-7420 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G053900 0.5kb upstream 0.5kb upstream 3417 true Chr15: 4240510-4243926 Glycine max
Glyma.15G053900 0.5kb upstream 0.5kb upstream 500 false Chr15: 4240510-4241009 Glycine max
Glyma.15G053900 0.5kb downstream 0.5kb downstream 3417 true Chr15: 4241010-4244426 Glycine max
Glyma.15G053900 0.5kb downstream 0.5kb downstream 500 false Chr15: 4243927-4244426 Glycine max
Glyma.15G053900 1.0kb upstream 1.0kb upstream 3917 true Chr15: 4240010-4243926 Glycine max
Glyma.15G053900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 4240010-4241009 Glycine max
Glyma.15G053900 1.0kb downstream 1.0kb downstream 3917 true Chr15: 4241010-4244926 Glycine max
Glyma.15G053900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 4243927-4244926 Glycine max
Glyma.15G053900 2.0kb upstream 2.0kb upstream 4917 true Chr15: 4239010-4243926 Glycine max
Glyma.15G053900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 4239010-4241009 Glycine max
Glyma.15G053900 2.0kb downstream 2.0kb downstream 4917 true Chr15: 4241010-4245926 Glycine max
Glyma.15G053900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 4243927-4245926 Glycine max
Glyma.15G053900 5.0kb upstream 5.0kb upstream 7917 true Chr15: 4236010-4243926 Glycine max
Glyma.15G053900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 4236010-4241009 Glycine max
Glyma.15G053900 5.0kb downstream 5.0kb downstream 7917 true Chr15: 4241010-4248926 Glycine max
Glyma.15G053900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 4243927-4248926 Glycine max
Glyma.15G053900 10.0kb upstream 10.0kb upstream 12917 true Chr15: 4231010-4243926 Glycine max
Glyma.15G053900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 4231010-4241009 Glycine max
Glyma.15G053900 10.0kb downstream 10.0kb downstream 12917 true Chr15: 4241010-4253926 Glycine max
Glyma.15G053900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 4243927-4253926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304383 5265 Fabidae View MSA
124063278 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0145865 0.0 0.0659679 Low Low
cufflinks 0.0869448 0.0 0.348463 Low  
cufflinks 1.8162 0.0 6.17255    
cufflinks 0.877663 0.0 3.17201    
cufflinks 3.0448 0.0 9.66201    
cufflinks 2.05126 0.0 6.86767    
cufflinks 12.9105 0.0 34.8492   High
cufflinks 0.14532 0.0 0.571273 Low  
cufflinks 0.946984 0.0 3.40421    
cufflinks 0.297        
cufflinks 0.259        
cufflinks 0.793        
cufflinks 2.317       High
cufflinks 4.315       High
cufflinks 0.02     Low Low
cufflinks 0.082     Low  
cufflinks 0.226        
cufflinks 3.665       High
cufflinks 0.076     Low  
cufflinks 0.06     Low  
cufflinks 0.143        
cufflinks 0.107        
cufflinks 0.156        
cufflinks 0.611        
cufflinks 0.033     Low Low
cufflinks 0.311        

0 Strain