Gene : Glyma.15G046000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10527:SF6 - IMPORTIN-4 Genomic Order:  460
Name:  ? Glyma.15G046000 Secondary Identifier:  ? PAC:30498080
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G046000 0.5kb upstream 0.5kb upstream 7775 true Chr15: 3667540-3675314 Glycine max
Glyma.15G046000 0.5kb upstream 0.5kb upstream 500 false Chr15: 3674815-3675314 Glycine max
Glyma.15G046000 0.5kb downstream 0.5kb downstream 7775 true Chr15: 3667040-3674814 Glycine max
Glyma.15G046000 0.5kb downstream 0.5kb downstream 500 false Chr15: 3667040-3667539 Glycine max
Glyma.15G046000 1.0kb upstream 1.0kb upstream 8275 true Chr15: 3667540-3675814 Glycine max
Glyma.15G046000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3674815-3675814 Glycine max
Glyma.15G046000 1.0kb downstream 1.0kb downstream 8275 true Chr15: 3666540-3674814 Glycine max
Glyma.15G046000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3666540-3667539 Glycine max
Glyma.15G046000 2.0kb upstream 2.0kb upstream 9275 true Chr15: 3667540-3676814 Glycine max
Glyma.15G046000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3674815-3676814 Glycine max
Glyma.15G046000 2.0kb downstream 2.0kb downstream 9275 true Chr15: 3665540-3674814 Glycine max
Glyma.15G046000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3665540-3667539 Glycine max
Glyma.15G046000 5.0kb upstream 5.0kb upstream 12275 true Chr15: 3667540-3679814 Glycine max
Glyma.15G046000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3674815-3679814 Glycine max
Glyma.15G046000 5.0kb downstream 5.0kb downstream 12275 true Chr15: 3662540-3674814 Glycine max
Glyma.15G046000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3662540-3667539 Glycine max
Glyma.15G046000 10.0kb upstream 10.0kb upstream 17275 true Chr15: 3667540-3684814 Glycine max
Glyma.15G046000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3674815-3684814 Glycine max
Glyma.15G046000 10.0kb downstream 10.0kb downstream 17275 true Chr15: 3657540-3674814 Glycine max
Glyma.15G046000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3657540-3667539 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249395 5265 Fabidae Singleton cluster - no MSA
124072695 5270 Rosid View MSA
123744874 5271 Pentapetalae View MSA
122785605 5272 Eudicot View MSA
122049923 5273 Angiosperm View MSA
123429119 5275 Viridiplantae View MSA
121344058 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.56292 0.0 22.9464    
cufflinks 7.54344 0.0 22.4154    
cufflinks 8.74711 0.0 30.6482    
cufflinks 10.0029 0.0 35.163    
cufflinks 12.7333 0.0 44.776   High
cufflinks 4.16508 0.0 13.0898   Low
cufflinks 8.42827 0.0 24.968    
cufflinks 10.907 0.0 38.099    
cufflinks 6.99867 0.0 20.9799    
cufflinks 3.62       High
cufflinks 2.086        
cufflinks 2.259        
cufflinks 3.046       High
cufflinks 3.947       High
cufflinks 1.67        
cufflinks 1.632       Low
cufflinks 2.354        
cufflinks 2.02        
cufflinks 3.343       High
cufflinks 1.699        
cufflinks 2.024        
cufflinks 1.603       Low
cufflinks 1.869        
cufflinks 1.758        
cufflinks 1.8        
cufflinks 2.034        

0 Strain