Gene : Glyma.15G046800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  468
Name:  ? Glyma.15G046800 Secondary Identifier:  ? PAC:30499831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G046800 0.5kb upstream 0.5kb upstream 2383 true Chr15: 3726469-3728851 Glycine max
Glyma.15G046800 0.5kb upstream 0.5kb upstream 500 false Chr15: 3726469-3726968 Glycine max
Glyma.15G046800 0.5kb downstream 0.5kb downstream 2383 true Chr15: 3726969-3729351 Glycine max
Glyma.15G046800 0.5kb downstream 0.5kb downstream 500 false Chr15: 3728852-3729351 Glycine max
Glyma.15G046800 1.0kb upstream 1.0kb upstream 2883 true Chr15: 3725969-3728851 Glycine max
Glyma.15G046800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 3725969-3726968 Glycine max
Glyma.15G046800 1.0kb downstream 1.0kb downstream 2883 true Chr15: 3726969-3729851 Glycine max
Glyma.15G046800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 3728852-3729851 Glycine max
Glyma.15G046800 2.0kb upstream 2.0kb upstream 3883 true Chr15: 3724969-3728851 Glycine max
Glyma.15G046800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 3724969-3726968 Glycine max
Glyma.15G046800 2.0kb downstream 2.0kb downstream 3883 true Chr15: 3726969-3730851 Glycine max
Glyma.15G046800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 3728852-3730851 Glycine max
Glyma.15G046800 5.0kb upstream 5.0kb upstream 6883 true Chr15: 3721969-3728851 Glycine max
Glyma.15G046800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 3721969-3726968 Glycine max
Glyma.15G046800 5.0kb downstream 5.0kb downstream 6883 true Chr15: 3726969-3733851 Glycine max
Glyma.15G046800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 3728852-3733851 Glycine max
Glyma.15G046800 10.0kb upstream 10.0kb upstream 11883 true Chr15: 3716969-3728851 Glycine max
Glyma.15G046800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 3716969-3726968 Glycine max
Glyma.15G046800 10.0kb downstream 10.0kb downstream 11883 true Chr15: 3726969-3738851 Glycine max
Glyma.15G046800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 3728852-3738851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298425 5265 Fabidae View MSA
124036454 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.085385 0.0 0.353421 Low Low
cufflinks 0.110486 0.0 0.450759 Low  
cufflinks 0.264553 0.0 1.04161    
cufflinks 0.740929 0.0 2.79661   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.123237 0.0 0.499899 Low  
cufflinks 0.273547 0.0 1.07535    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.011     Low Low
cufflinks 0.216       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.02     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.745       High
cufflinks 0.018     Low  
cufflinks 0.066     Low  
cufflinks 0.022     Low  
cufflinks 0.048     Low  
cufflinks 0.02     Low  
cufflinks 0.011     Low Low
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain