Gene : Glyma.15G094600 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0500 - Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins Genomic Order:  946
Name:  ? Glyma.15G094600 Secondary Identifier:  ? PAC:30496418
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G094600 0.5kb upstream 0.5kb upstream 5516 true Chr15: 7352876-7358391 Glycine max
Glyma.15G094600 0.5kb upstream 0.5kb upstream 500 false Chr15: 7357892-7358391 Glycine max
Glyma.15G094600 0.5kb downstream 0.5kb downstream 5516 true Chr15: 7352376-7357891 Glycine max
Glyma.15G094600 0.5kb downstream 0.5kb downstream 500 false Chr15: 7352376-7352875 Glycine max
Glyma.15G094600 1.0kb upstream 1.0kb upstream 6016 true Chr15: 7352876-7358891 Glycine max
Glyma.15G094600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 7357892-7358891 Glycine max
Glyma.15G094600 1.0kb downstream 1.0kb downstream 6016 true Chr15: 7351876-7357891 Glycine max
Glyma.15G094600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 7351876-7352875 Glycine max
Glyma.15G094600 2.0kb upstream 2.0kb upstream 7016 true Chr15: 7352876-7359891 Glycine max
Glyma.15G094600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 7357892-7359891 Glycine max
Glyma.15G094600 2.0kb downstream 2.0kb downstream 7016 true Chr15: 7350876-7357891 Glycine max
Glyma.15G094600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 7350876-7352875 Glycine max
Glyma.15G094600 5.0kb upstream 5.0kb upstream 10016 true Chr15: 7352876-7362891 Glycine max
Glyma.15G094600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 7357892-7362891 Glycine max
Glyma.15G094600 5.0kb downstream 5.0kb downstream 10016 true Chr15: 7347876-7357891 Glycine max
Glyma.15G094600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 7347876-7352875 Glycine max
Glyma.15G094600 10.0kb upstream 10.0kb upstream 15016 true Chr15: 7352876-7367891 Glycine max
Glyma.15G094600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 7357892-7367891 Glycine max
Glyma.15G094600 10.0kb downstream 10.0kb downstream 15016 true Chr15: 7342876-7357891 Glycine max
Glyma.15G094600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 7342876-7352875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309593 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03793 0.0 16.017    
cufflinks 1.3046 0.0 9.50626    
cufflinks 1.30502 0.0 11.7581    
cufflinks 4.07026 0.0 22.8927   High
cufflinks 1.87972 0.0 17.9119    
cufflinks 3.27657 0.0 14.2051   High
cufflinks 0.939259 0.0 4.81429   Low
cufflinks 1.75228 0.0 16.0585    
cufflinks 1.69386 0.0 7.48393    
cufflinks 0.73       High
cufflinks 0.002     Low Low
cufflinks 0.629       High
cufflinks 0.214        
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.165        
cufflinks 0.017     Low  
cufflinks 0.458        
cufflinks 0.487        
cufflinks 0.069     Low  
cufflinks 0.007     Low Low
cufflinks 0.101        
cufflinks 0.418        
cufflinks 0.004     Low Low
cufflinks 0.138        
cufflinks 0.009     Low Low

0 Strain