Gene : Glyma.15G088300 G. max Wm82.a2.v1
Defline:  (1 of 3) PF06884 - Protein of unknown function (DUF1264) (DUF1264) Genomic Order:  883
Name:  ? Glyma.15G088300 Secondary Identifier:  ? PAC:30497010
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G088300 0.5kb upstream 0.5kb upstream 1874 true Chr15: 6783146-6785019 Glycine max
Glyma.15G088300 0.5kb upstream 0.5kb upstream 500 false Chr15: 6783146-6783645 Glycine max
Glyma.15G088300 0.5kb downstream 0.5kb downstream 1874 true Chr15: 6783646-6785519 Glycine max
Glyma.15G088300 0.5kb downstream 0.5kb downstream 500 false Chr15: 6785020-6785519 Glycine max
Glyma.15G088300 1.0kb upstream 1.0kb upstream 2374 true Chr15: 6782646-6785019 Glycine max
Glyma.15G088300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6782646-6783645 Glycine max
Glyma.15G088300 1.0kb downstream 1.0kb downstream 2374 true Chr15: 6783646-6786019 Glycine max
Glyma.15G088300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6785020-6786019 Glycine max
Glyma.15G088300 2.0kb upstream 2.0kb upstream 3374 true Chr15: 6781646-6785019 Glycine max
Glyma.15G088300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6781646-6783645 Glycine max
Glyma.15G088300 2.0kb downstream 2.0kb downstream 3374 true Chr15: 6783646-6787019 Glycine max
Glyma.15G088300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6785020-6787019 Glycine max
Glyma.15G088300 5.0kb upstream 5.0kb upstream 6374 true Chr15: 6778646-6785019 Glycine max
Glyma.15G088300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6778646-6783645 Glycine max
Glyma.15G088300 5.0kb downstream 5.0kb downstream 6374 true Chr15: 6783646-6790019 Glycine max
Glyma.15G088300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6785020-6790019 Glycine max
Glyma.15G088300 10.0kb upstream 10.0kb upstream 11374 true Chr15: 6773646-6785019 Glycine max
Glyma.15G088300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6773646-6783645 Glycine max
Glyma.15G088300 10.0kb downstream 10.0kb downstream 11374 true Chr15: 6783646-6795019 Glycine max
Glyma.15G088300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6785020-6795019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249547 5265 Fabidae Singleton cluster - no MSA
124038727 5270 Rosid View MSA
123749042 5271 Pentapetalae View MSA
122790302 5272 Eudicot View MSA
122044029 5273 Angiosperm View MSA
121350968 5274 Embryophyte View MSA
123426811 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.13464 0.0 0.558325 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.86575 0.0 6.89884    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.011     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain