Gene : Glyma.15G088600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS Genomic Order:  886
Name:  ? Glyma.15G088600 Secondary Identifier:  ? PAC:30498429
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G088600 0.5kb upstream 0.5kb upstream 10212 true Chr15: 6825679-6835890 Glycine max
Glyma.15G088600 0.5kb upstream 0.5kb upstream 500 false Chr15: 6825679-6826178 Glycine max
Glyma.15G088600 0.5kb downstream 0.5kb downstream 10212 true Chr15: 6826179-6836390 Glycine max
Glyma.15G088600 0.5kb downstream 0.5kb downstream 500 false Chr15: 6835891-6836390 Glycine max
Glyma.15G088600 1.0kb upstream 1.0kb upstream 10712 true Chr15: 6825179-6835890 Glycine max
Glyma.15G088600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6825179-6826178 Glycine max
Glyma.15G088600 1.0kb downstream 1.0kb downstream 10712 true Chr15: 6826179-6836890 Glycine max
Glyma.15G088600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6835891-6836890 Glycine max
Glyma.15G088600 2.0kb upstream 2.0kb upstream 11712 true Chr15: 6824179-6835890 Glycine max
Glyma.15G088600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6824179-6826178 Glycine max
Glyma.15G088600 2.0kb downstream 2.0kb downstream 11712 true Chr15: 6826179-6837890 Glycine max
Glyma.15G088600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6835891-6837890 Glycine max
Glyma.15G088600 5.0kb upstream 5.0kb upstream 14712 true Chr15: 6821179-6835890 Glycine max
Glyma.15G088600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6821179-6826178 Glycine max
Glyma.15G088600 5.0kb downstream 5.0kb downstream 14712 true Chr15: 6826179-6840890 Glycine max
Glyma.15G088600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6835891-6840890 Glycine max
Glyma.15G088600 10.0kb upstream 10.0kb upstream 19712 true Chr15: 6816179-6835890 Glycine max
Glyma.15G088600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6816179-6826178 Glycine max
Glyma.15G088600 10.0kb downstream 10.0kb downstream 19712 true Chr15: 6826179-6845890 Glycine max
Glyma.15G088600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6835891-6845890 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59402 0.0 13.4128    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 26.2215 0.0 84.681 High  
cufflinks 73.7927 0.0 255.444 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 19.2068 0.0 62.8936    
cufflinks 0.191473 0.0 0.760369 Low  
cufflinks 0.0485994 0.0 0.213118 Low Low
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.346       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.006     Low  
cufflinks 2.167       High
cufflinks 0.006     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.081     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain