Gene : Glyma.15G089700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22880:SF153 - TRANSCRIPTION FACTOR GTE11-RELATED Genomic Order:  897
Name:  ? Glyma.15G089700 Secondary Identifier:  ? PAC:30499138
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G089700 0.5kb upstream 0.5kb upstream 4557 true Chr15: 6910840-6915396 Glycine max
Glyma.15G089700 0.5kb upstream 0.5kb upstream 500 false Chr15: 6910840-6911339 Glycine max
Glyma.15G089700 0.5kb downstream 0.5kb downstream 4557 true Chr15: 6911340-6915896 Glycine max
Glyma.15G089700 0.5kb downstream 0.5kb downstream 500 false Chr15: 6915397-6915896 Glycine max
Glyma.15G089700 1.0kb upstream 1.0kb upstream 5057 true Chr15: 6910340-6915396 Glycine max
Glyma.15G089700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6910340-6911339 Glycine max
Glyma.15G089700 1.0kb downstream 1.0kb downstream 5057 true Chr15: 6911340-6916396 Glycine max
Glyma.15G089700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6915397-6916396 Glycine max
Glyma.15G089700 2.0kb upstream 2.0kb upstream 6057 true Chr15: 6909340-6915396 Glycine max
Glyma.15G089700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6909340-6911339 Glycine max
Glyma.15G089700 2.0kb downstream 2.0kb downstream 6057 true Chr15: 6911340-6917396 Glycine max
Glyma.15G089700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6915397-6917396 Glycine max
Glyma.15G089700 5.0kb upstream 5.0kb upstream 9057 true Chr15: 6906340-6915396 Glycine max
Glyma.15G089700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6906340-6911339 Glycine max
Glyma.15G089700 5.0kb downstream 5.0kb downstream 9057 true Chr15: 6911340-6920396 Glycine max
Glyma.15G089700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6915397-6920396 Glycine max
Glyma.15G089700 10.0kb upstream 10.0kb upstream 14057 true Chr15: 6901340-6915396 Glycine max
Glyma.15G089700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6901340-6911339 Glycine max
Glyma.15G089700 10.0kb downstream 10.0kb downstream 14057 true Chr15: 6911340-6925396 Glycine max
Glyma.15G089700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6915397-6925396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300876 5265 Fabidae View MSA
124060921 5270 Rosid View MSA
123751846 5271 Pentapetalae View MSA
122796315 5272 Eudicot View MSA
122048835 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121311132 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5806 0.0 69.9612    
cufflinks 17.65 0.0 62.5256    
cufflinks 27.0539 0.0 103.285 High High
cufflinks 14.3425 0.0 49.8732    
cufflinks 13.9211 0.0 48.6125    
cufflinks 8.33972 0.0 28.769   Low
cufflinks 20.7096 0.0 74.5395    
cufflinks 13.4975 0.0 47.2073    
cufflinks 21.093 0.0 76.6741 High  
cufflinks 5.083        
cufflinks 4.088       Low
cufflinks 11.326     High High
cufflinks 4.628        
cufflinks 5.75        
cufflinks 7.919     High  
cufflinks 8.568     High  
cufflinks 5.745        
cufflinks 7.724     High  
cufflinks 7.581     High  
cufflinks 9.068     High High
cufflinks 3.747       Low
cufflinks 8.273     High  
cufflinks 7.475     High  
cufflinks 3.351       Low
cufflinks 8.534     High  
cufflinks 4.939        

0 Strain