Gene : Glyma.15G090800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10965//PTHR10965:SF5 - 60S RIBOSOMAL PROTEIN L38 Genomic Order:  908
Name:  ? Glyma.15G090800 Secondary Identifier:  ? PAC:30496735
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G090800 0.5kb upstream 0.5kb upstream 1988 true Chr15: 6973952-6975939 Glycine max
Glyma.15G090800 0.5kb upstream 0.5kb upstream 500 false Chr15: 6975440-6975939 Glycine max
Glyma.15G090800 0.5kb downstream 0.5kb downstream 1988 true Chr15: 6973452-6975439 Glycine max
Glyma.15G090800 0.5kb downstream 0.5kb downstream 500 false Chr15: 6973452-6973951 Glycine max
Glyma.15G090800 1.0kb upstream 1.0kb upstream 2488 true Chr15: 6973952-6976439 Glycine max
Glyma.15G090800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6975440-6976439 Glycine max
Glyma.15G090800 1.0kb downstream 1.0kb downstream 2488 true Chr15: 6972952-6975439 Glycine max
Glyma.15G090800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6972952-6973951 Glycine max
Glyma.15G090800 2.0kb upstream 2.0kb upstream 3488 true Chr15: 6973952-6977439 Glycine max
Glyma.15G090800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6975440-6977439 Glycine max
Glyma.15G090800 2.0kb downstream 2.0kb downstream 3488 true Chr15: 6971952-6975439 Glycine max
Glyma.15G090800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6971952-6973951 Glycine max
Glyma.15G090800 5.0kb upstream 5.0kb upstream 6488 true Chr15: 6973952-6980439 Glycine max
Glyma.15G090800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6975440-6980439 Glycine max
Glyma.15G090800 5.0kb downstream 5.0kb downstream 6488 true Chr15: 6968952-6975439 Glycine max
Glyma.15G090800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6968952-6973951 Glycine max
Glyma.15G090800 10.0kb upstream 10.0kb upstream 11488 true Chr15: 6973952-6985439 Glycine max
Glyma.15G090800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6975440-6985439 Glycine max
Glyma.15G090800 10.0kb downstream 10.0kb downstream 11488 true Chr15: 6963952-6975439 Glycine max
Glyma.15G090800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6963952-6973951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029666 5273 Angiosperm View MSA
122249591 5265 Fabidae Singleton cluster - no MSA
124074373 5270 Rosid View MSA
123750152 5271 Pentapetalae View MSA
122794948 5272 Eudicot View MSA
121351263 5274 Embryophyte View MSA
123428665 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.4039 0.0 201.691 High  
cufflinks 117.358 0.0 373.302 High  
cufflinks 45.2634 0.0 135.664 High Low
cufflinks 35.6071 0.0 108.326 High Low
cufflinks 149.663 0.0 500.692 High  
cufflinks 167.979 0.0 575.433 High High
cufflinks 141.159 0.0 464.357 High  
cufflinks 92.6398 0.0 285.882 High  
cufflinks 96.9606 0.0 299.607 High  
cufflinks 26.531     High  
cufflinks 12.002     High Low
cufflinks 14.504     High Low
cufflinks 53.362     High High
cufflinks 79.521     High High
cufflinks 12.159     High Low
cufflinks 47.621     High  
cufflinks 18.185     High  
cufflinks 24.846     High  
cufflinks 29.864     High  
cufflinks 40.557     High  
cufflinks 16.306     High  
cufflinks 40.625     High  
cufflinks 35.347     High  
cufflinks 12.191     High Low
cufflinks 47.561     High  
cufflinks 21.375     High  

0 Strain