Gene : Glyma.15G077000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  770
Name:  ? Glyma.15G077000 Secondary Identifier:  ? PAC:30499942
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G077000 0.5kb upstream 0.5kb upstream 1906 true Chr15: 5920204-5922109 Glycine max
Glyma.15G077000 0.5kb upstream 0.5kb upstream 500 false Chr15: 5920204-5920703 Glycine max
Glyma.15G077000 0.5kb downstream 0.5kb downstream 1906 true Chr15: 5920704-5922609 Glycine max
Glyma.15G077000 0.5kb downstream 0.5kb downstream 500 false Chr15: 5922110-5922609 Glycine max
Glyma.15G077000 1.0kb upstream 1.0kb upstream 2406 true Chr15: 5919704-5922109 Glycine max
Glyma.15G077000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5919704-5920703 Glycine max
Glyma.15G077000 1.0kb downstream 1.0kb downstream 2406 true Chr15: 5920704-5923109 Glycine max
Glyma.15G077000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5922110-5923109 Glycine max
Glyma.15G077000 2.0kb upstream 2.0kb upstream 3406 true Chr15: 5918704-5922109 Glycine max
Glyma.15G077000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5918704-5920703 Glycine max
Glyma.15G077000 2.0kb downstream 2.0kb downstream 3406 true Chr15: 5920704-5924109 Glycine max
Glyma.15G077000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5922110-5924109 Glycine max
Glyma.15G077000 5.0kb upstream 5.0kb upstream 6406 true Chr15: 5915704-5922109 Glycine max
Glyma.15G077000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5915704-5920703 Glycine max
Glyma.15G077000 5.0kb downstream 5.0kb downstream 6406 true Chr15: 5920704-5927109 Glycine max
Glyma.15G077000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5922110-5927109 Glycine max
Glyma.15G077000 10.0kb upstream 10.0kb upstream 11406 true Chr15: 5910704-5922109 Glycine max
Glyma.15G077000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5910704-5920703 Glycine max
Glyma.15G077000 10.0kb downstream 10.0kb downstream 11406 true Chr15: 5920704-5932109 Glycine max
Glyma.15G077000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5922110-5932109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306015 5265 Fabidae View MSA
124064356 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.98949 0.0 6.92798    
cufflinks 9.78393 0.0 27.8478    
cufflinks 14.7188 0.0 40.4204   High
cufflinks 1.04903 0.0 3.83057   Low
cufflinks 4.82338 0.0 14.9593    
cufflinks 9.23253 0.0 26.337    
cufflinks 0.673223 0.0 2.5099   Low
cufflinks 2.03792 0.0 7.09535    
cufflinks 6.02256 0.0 18.1789    
cufflinks 0.161       Low
cufflinks 11.977     High  
cufflinks 4.296        
cufflinks 1.882        
cufflinks 0.834        
cufflinks 35.87     High High
cufflinks 0.327        
cufflinks 27.3     High High
cufflinks 1.305        
cufflinks 4.851        
cufflinks 0.175       Low
cufflinks 12.399     High  
cufflinks 0.116       Low
cufflinks 0.304        
cufflinks 5.368        
cufflinks 0.057     Low Low
cufflinks 15.119     High High

0 Strain