Gene : Glyma.15G077100 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  771
Name:  ? Glyma.15G077100 Secondary Identifier:  ? PAC:30497512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G077100 0.5kb upstream 0.5kb upstream 2136 true Chr15: 5938260-5940395 Glycine max
Glyma.15G077100 0.5kb upstream 0.5kb upstream 500 false Chr15: 5939896-5940395 Glycine max
Glyma.15G077100 0.5kb downstream 0.5kb downstream 2136 true Chr15: 5937760-5939895 Glycine max
Glyma.15G077100 0.5kb downstream 0.5kb downstream 500 false Chr15: 5937760-5938259 Glycine max
Glyma.15G077100 1.0kb upstream 1.0kb upstream 2636 true Chr15: 5938260-5940895 Glycine max
Glyma.15G077100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5939896-5940895 Glycine max
Glyma.15G077100 1.0kb downstream 1.0kb downstream 2636 true Chr15: 5937260-5939895 Glycine max
Glyma.15G077100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5937260-5938259 Glycine max
Glyma.15G077100 2.0kb upstream 2.0kb upstream 3636 true Chr15: 5938260-5941895 Glycine max
Glyma.15G077100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5939896-5941895 Glycine max
Glyma.15G077100 2.0kb downstream 2.0kb downstream 3636 true Chr15: 5936260-5939895 Glycine max
Glyma.15G077100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5936260-5938259 Glycine max
Glyma.15G077100 5.0kb upstream 5.0kb upstream 6636 true Chr15: 5938260-5944895 Glycine max
Glyma.15G077100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5939896-5944895 Glycine max
Glyma.15G077100 5.0kb downstream 5.0kb downstream 6636 true Chr15: 5933260-5939895 Glycine max
Glyma.15G077100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5933260-5938259 Glycine max
Glyma.15G077100 10.0kb upstream 10.0kb upstream 11636 true Chr15: 5938260-5949895 Glycine max
Glyma.15G077100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5939896-5949895 Glycine max
Glyma.15G077100 10.0kb downstream 10.0kb downstream 11636 true Chr15: 5928260-5939895 Glycine max
Glyma.15G077100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5928260-5938259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312112 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29444 0.0 18.1285    
cufflinks 1.59971 0.0 5.53165    
cufflinks 6.58202 0.0 19.0471    
cufflinks 0.704916 0.0 2.58723    
cufflinks 3.08808 0.0 9.73881    
cufflinks 7.72016 0.0 21.6989   High
cufflinks 0.140337 0.0 0.552282 Low Low
cufflinks 1.5317 0.0 5.31876    
cufflinks 2.61288 0.0 8.47631    
cufflinks 14.255     High High
cufflinks 8.26     High  
cufflinks 12.821     High High
cufflinks 4.928        
cufflinks 0.823       Low
cufflinks 7.475     High  
cufflinks 2.163        
cufflinks 19.254     High High
cufflinks 10.822     High  
cufflinks 1.714        
cufflinks 0.725       Low
cufflinks 3.562        
cufflinks 1.085       Low
cufflinks 2.928        
cufflinks 4.653        
cufflinks 0.671       Low
cufflinks 6.132        

0 Strain