Gene : Glyma.15G078800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  788
Name:  ? Glyma.15G078800 Secondary Identifier:  ? PAC:30496815
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G078800 0.5kb upstream 0.5kb upstream 4734 true Chr15: 6049763-6054496 Glycine max
Glyma.15G078800 0.5kb upstream 0.5kb upstream 500 false Chr15: 6053997-6054496 Glycine max
Glyma.15G078800 0.5kb downstream 0.5kb downstream 4734 true Chr15: 6049263-6053996 Glycine max
Glyma.15G078800 0.5kb downstream 0.5kb downstream 500 false Chr15: 6049263-6049762 Glycine max
Glyma.15G078800 1.0kb upstream 1.0kb upstream 5234 true Chr15: 6049763-6054996 Glycine max
Glyma.15G078800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6053997-6054996 Glycine max
Glyma.15G078800 1.0kb downstream 1.0kb downstream 5234 true Chr15: 6048763-6053996 Glycine max
Glyma.15G078800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6048763-6049762 Glycine max
Glyma.15G078800 2.0kb upstream 2.0kb upstream 6234 true Chr15: 6049763-6055996 Glycine max
Glyma.15G078800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6053997-6055996 Glycine max
Glyma.15G078800 2.0kb downstream 2.0kb downstream 6234 true Chr15: 6047763-6053996 Glycine max
Glyma.15G078800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6047763-6049762 Glycine max
Glyma.15G078800 5.0kb upstream 5.0kb upstream 9234 true Chr15: 6049763-6058996 Glycine max
Glyma.15G078800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6053997-6058996 Glycine max
Glyma.15G078800 5.0kb downstream 5.0kb downstream 9234 true Chr15: 6044763-6053996 Glycine max
Glyma.15G078800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6044763-6049762 Glycine max
Glyma.15G078800 10.0kb upstream 10.0kb upstream 14234 true Chr15: 6049763-6063996 Glycine max
Glyma.15G078800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6053997-6063996 Glycine max
Glyma.15G078800 10.0kb downstream 10.0kb downstream 14234 true Chr15: 6039763-6053996 Glycine max
Glyma.15G078800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6039763-6049762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309697 5265 Fabidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.833 0.0 13.5427    
cufflinks 14.9137 0.0 39.8269   High
cufflinks 7.30205 0.0 19.7701    
cufflinks 11.3619 0.0 30.3389   High
cufflinks 2.50697 0.0 7.63676    
cufflinks 2.24484 0.0 6.93646   Low
cufflinks 3.85662 0.0 11.0929    
cufflinks 7.00188 0.0 19.0248    
cufflinks 2.10384 0.0 6.56008   Low
cufflinks 10.341     High  
cufflinks 0.246       Low
cufflinks 6.265        
cufflinks 3.032        
cufflinks 2.403        
cufflinks 0.313       Low
cufflinks 9.609     High  
cufflinks 2.293        
cufflinks 6.19        
cufflinks 20.013     High High
cufflinks 9.385     High  
cufflinks 0.362       Low
cufflinks 11.578     High  
cufflinks 7.265        
cufflinks 0.234       Low
cufflinks 8.385     High  
cufflinks 1.261        

0 Strain