Gene : Glyma.15G082000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  820
Name:  ? Glyma.15G082000 Secondary Identifier:  ? PAC:30498892
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G082000 0.5kb upstream 0.5kb upstream 2545 true Chr15: 6254713-6257257 Glycine max
Glyma.15G082000 0.5kb upstream 0.5kb upstream 500 false Chr15: 6254713-6255212 Glycine max
Glyma.15G082000 0.5kb downstream 0.5kb downstream 2545 true Chr15: 6255213-6257757 Glycine max
Glyma.15G082000 0.5kb downstream 0.5kb downstream 500 false Chr15: 6257258-6257757 Glycine max
Glyma.15G082000 1.0kb upstream 1.0kb upstream 3045 true Chr15: 6254213-6257257 Glycine max
Glyma.15G082000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6254213-6255212 Glycine max
Glyma.15G082000 1.0kb downstream 1.0kb downstream 3045 true Chr15: 6255213-6258257 Glycine max
Glyma.15G082000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6257258-6258257 Glycine max
Glyma.15G082000 2.0kb upstream 2.0kb upstream 4045 true Chr15: 6253213-6257257 Glycine max
Glyma.15G082000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6253213-6255212 Glycine max
Glyma.15G082000 2.0kb downstream 2.0kb downstream 4045 true Chr15: 6255213-6259257 Glycine max
Glyma.15G082000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6257258-6259257 Glycine max
Glyma.15G082000 5.0kb upstream 5.0kb upstream 7045 true Chr15: 6250213-6257257 Glycine max
Glyma.15G082000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6250213-6255212 Glycine max
Glyma.15G082000 5.0kb downstream 5.0kb downstream 7045 true Chr15: 6255213-6262257 Glycine max
Glyma.15G082000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6257258-6262257 Glycine max
Glyma.15G082000 10.0kb upstream 10.0kb upstream 12045 true Chr15: 6245213-6257257 Glycine max
Glyma.15G082000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6245213-6255212 Glycine max
Glyma.15G082000 10.0kb downstream 10.0kb downstream 12045 true Chr15: 6255213-6267257 Glycine max
Glyma.15G082000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6257258-6267257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301993 5265 Fabidae View MSA
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.0315 0.0 88.7412 High High
cufflinks 35.8747 0.0 96.0762 High High
cufflinks 8.29587 0.0 25.6323    
cufflinks 14.3136 0.0 41.0259    
cufflinks 9.59077 0.0 28.947    
cufflinks 6.46775 0.0 20.6822   Low
cufflinks 19.7768 0.0 54.8535    
cufflinks 14.9395 0.0 42.4596    
cufflinks 5.49121 0.0 17.8689   Low
cufflinks 7.226        
cufflinks 0.595       Low
cufflinks 3.94        
cufflinks 1.898        
cufflinks 1.81        
cufflinks 0.937        
cufflinks 35.861     High High
cufflinks 0.82       Low
cufflinks 4.778        
cufflinks 10.639     High  
cufflinks 35.626     High High
cufflinks 0.868        
cufflinks 33.136     High High
cufflinks 38.706     High High
cufflinks 0.741       Low
cufflinks 34.158     High High
cufflinks 0.677       Low

0 Strain