Gene : Glyma.15G082300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  823
Name:  ? Glyma.15G082300 Secondary Identifier:  ? PAC:30495931
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G082300 0.5kb upstream 0.5kb upstream 2140 true Chr15: 6278834-6280973 Glycine max
Glyma.15G082300 0.5kb upstream 0.5kb upstream 500 false Chr15: 6278834-6279333 Glycine max
Glyma.15G082300 0.5kb downstream 0.5kb downstream 2140 true Chr15: 6279334-6281473 Glycine max
Glyma.15G082300 0.5kb downstream 0.5kb downstream 500 false Chr15: 6280974-6281473 Glycine max
Glyma.15G082300 1.0kb upstream 1.0kb upstream 2640 true Chr15: 6278334-6280973 Glycine max
Glyma.15G082300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6278334-6279333 Glycine max
Glyma.15G082300 1.0kb downstream 1.0kb downstream 2640 true Chr15: 6279334-6281973 Glycine max
Glyma.15G082300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6280974-6281973 Glycine max
Glyma.15G082300 2.0kb upstream 2.0kb upstream 3640 true Chr15: 6277334-6280973 Glycine max
Glyma.15G082300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6277334-6279333 Glycine max
Glyma.15G082300 2.0kb downstream 2.0kb downstream 3640 true Chr15: 6279334-6282973 Glycine max
Glyma.15G082300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6280974-6282973 Glycine max
Glyma.15G082300 5.0kb upstream 5.0kb upstream 6640 true Chr15: 6274334-6280973 Glycine max
Glyma.15G082300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6274334-6279333 Glycine max
Glyma.15G082300 5.0kb downstream 5.0kb downstream 6640 true Chr15: 6279334-6285973 Glycine max
Glyma.15G082300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6280974-6285973 Glycine max
Glyma.15G082300 10.0kb upstream 10.0kb upstream 11640 true Chr15: 6269334-6280973 Glycine max
Glyma.15G082300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6269334-6279333 Glycine max
Glyma.15G082300 10.0kb downstream 10.0kb downstream 11640 true Chr15: 6279334-6290973 Glycine max
Glyma.15G082300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6280974-6290973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305742 5265 Fabidae View MSA
124069142 5270 Rosid View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 75.7425 0.0 206.083 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0457058 0.0 0.197354 Low  
cufflinks 0.259983 0.0 1.02436 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.135038 0.0 0.544751 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.012     Low  
cufflinks 14.135     High High
cufflinks 0.01     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.009     Low  
cufflinks 65.192     High High
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.014     Low  
cufflinks 0.011     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  

0 Strain