Gene : Glyma.15G082200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12411:SF371 - CATHEPSIN O Genomic Order:  822
Name:  ? Glyma.15G082200 Secondary Identifier:  ? PAC:30499824
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G082200 0.5kb upstream 0.5kb upstream 2946 true Chr15: 6274900-6277845 Glycine max
Glyma.15G082200 0.5kb upstream 0.5kb upstream 500 false Chr15: 6274900-6275399 Glycine max
Glyma.15G082200 0.5kb downstream 0.5kb downstream 2946 true Chr15: 6275400-6278345 Glycine max
Glyma.15G082200 0.5kb downstream 0.5kb downstream 500 false Chr15: 6277846-6278345 Glycine max
Glyma.15G082200 1.0kb upstream 1.0kb upstream 3446 true Chr15: 6274400-6277845 Glycine max
Glyma.15G082200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6274400-6275399 Glycine max
Glyma.15G082200 1.0kb downstream 1.0kb downstream 3446 true Chr15: 6275400-6278845 Glycine max
Glyma.15G082200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6277846-6278845 Glycine max
Glyma.15G082200 2.0kb upstream 2.0kb upstream 4446 true Chr15: 6273400-6277845 Glycine max
Glyma.15G082200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6273400-6275399 Glycine max
Glyma.15G082200 2.0kb downstream 2.0kb downstream 4446 true Chr15: 6275400-6279845 Glycine max
Glyma.15G082200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6277846-6279845 Glycine max
Glyma.15G082200 5.0kb upstream 5.0kb upstream 7446 true Chr15: 6270400-6277845 Glycine max
Glyma.15G082200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6270400-6275399 Glycine max
Glyma.15G082200 5.0kb downstream 5.0kb downstream 7446 true Chr15: 6275400-6282845 Glycine max
Glyma.15G082200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6277846-6282845 Glycine max
Glyma.15G082200 10.0kb upstream 10.0kb upstream 12446 true Chr15: 6265400-6277845 Glycine max
Glyma.15G082200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6265400-6275399 Glycine max
Glyma.15G082200 10.0kb downstream 10.0kb downstream 12446 true Chr15: 6275400-6287845 Glycine max
Glyma.15G082200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6277846-6287845 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122297847 5265 Fabidae View MSA
124036180 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.62524 0.0 5.64903    
cufflinks 0.030191 0.0 0.129384 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.338084 0.0 1.28842    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.961       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.584       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.503        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.591        

0 Strain