Gene : Glyma.15G085500 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  855
Name:  ? Glyma.15G085500 Secondary Identifier:  ? PAC:30499285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G085500 0.5kb upstream 0.5kb upstream 2128 true Chr15: 6554593-6556720 Glycine max
Glyma.15G085500 0.5kb upstream 0.5kb upstream 500 false Chr15: 6556221-6556720 Glycine max
Glyma.15G085500 0.5kb downstream 0.5kb downstream 2128 true Chr15: 6554093-6556220 Glycine max
Glyma.15G085500 0.5kb downstream 0.5kb downstream 500 false Chr15: 6554093-6554592 Glycine max
Glyma.15G085500 1.0kb upstream 1.0kb upstream 2628 true Chr15: 6554593-6557220 Glycine max
Glyma.15G085500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 6556221-6557220 Glycine max
Glyma.15G085500 1.0kb downstream 1.0kb downstream 2628 true Chr15: 6553593-6556220 Glycine max
Glyma.15G085500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 6553593-6554592 Glycine max
Glyma.15G085500 2.0kb upstream 2.0kb upstream 3628 true Chr15: 6554593-6558220 Glycine max
Glyma.15G085500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 6556221-6558220 Glycine max
Glyma.15G085500 2.0kb downstream 2.0kb downstream 3628 true Chr15: 6552593-6556220 Glycine max
Glyma.15G085500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 6552593-6554592 Glycine max
Glyma.15G085500 5.0kb upstream 5.0kb upstream 6628 true Chr15: 6554593-6561220 Glycine max
Glyma.15G085500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 6556221-6561220 Glycine max
Glyma.15G085500 5.0kb downstream 5.0kb downstream 6628 true Chr15: 6549593-6556220 Glycine max
Glyma.15G085500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 6549593-6554592 Glycine max
Glyma.15G085500 10.0kb upstream 10.0kb upstream 11628 true Chr15: 6554593-6566220 Glycine max
Glyma.15G085500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 6556221-6566220 Glycine max
Glyma.15G085500 10.0kb downstream 10.0kb downstream 11628 true Chr15: 6544593-6556220 Glycine max
Glyma.15G085500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 6544593-6554592 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70576 0.0 8.70412    
cufflinks 1.44985 0.0 5.01785    
cufflinks 0.861417 0.0 3.09763    
cufflinks 0.817774 0.0 2.95556    
cufflinks 1.16715 0.0 4.12717    
cufflinks 5.2145 0.0 15.2849   High
cufflinks 0.31202 0.0 1.18691   Low
cufflinks 9.62884 0.0 26.3803   High
cufflinks 1.73267 0.0 5.88828    
cufflinks 5.135       High
cufflinks 0.778        
cufflinks 0.979        
cufflinks 2.102        
cufflinks 0.369       Low
cufflinks 0.115       Low
cufflinks 1.682        
cufflinks 3.687       High
cufflinks 1.741        
cufflinks 2.734        
cufflinks 1.089        
cufflinks 0.862        
cufflinks 1.658        
cufflinks 1.441        
cufflinks 1.767        
cufflinks 1.521        
cufflinks 0.977        

0 Strain