Gene : Glyma.15G072100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Genomic Order:  721
Name:  ? Glyma.15G072100 Secondary Identifier:  ? PAC:30499585
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G072100 0.5kb upstream 0.5kb upstream 3901 true Chr15: 5516387-5520287 Glycine max
Glyma.15G072100 0.5kb upstream 0.5kb upstream 500 false Chr15: 5516387-5516886 Glycine max
Glyma.15G072100 0.5kb downstream 0.5kb downstream 3901 true Chr15: 5516887-5520787 Glycine max
Glyma.15G072100 0.5kb downstream 0.5kb downstream 500 false Chr15: 5520288-5520787 Glycine max
Glyma.15G072100 1.0kb upstream 1.0kb upstream 4401 true Chr15: 5515887-5520287 Glycine max
Glyma.15G072100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5515887-5516886 Glycine max
Glyma.15G072100 1.0kb downstream 1.0kb downstream 4401 true Chr15: 5516887-5521287 Glycine max
Glyma.15G072100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5520288-5521287 Glycine max
Glyma.15G072100 2.0kb upstream 2.0kb upstream 5401 true Chr15: 5514887-5520287 Glycine max
Glyma.15G072100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5514887-5516886 Glycine max
Glyma.15G072100 2.0kb downstream 2.0kb downstream 5401 true Chr15: 5516887-5522287 Glycine max
Glyma.15G072100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5520288-5522287 Glycine max
Glyma.15G072100 5.0kb upstream 5.0kb upstream 8401 true Chr15: 5511887-5520287 Glycine max
Glyma.15G072100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5511887-5516886 Glycine max
Glyma.15G072100 5.0kb downstream 5.0kb downstream 8401 true Chr15: 5516887-5525287 Glycine max
Glyma.15G072100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5520288-5525287 Glycine max
Glyma.15G072100 10.0kb upstream 10.0kb upstream 13401 true Chr15: 5506887-5520287 Glycine max
Glyma.15G072100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5506887-5516886 Glycine max
Glyma.15G072100 10.0kb downstream 10.0kb downstream 13401 true Chr15: 5516887-5530287 Glycine max
Glyma.15G072100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5520288-5530287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300779 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.5842 0.0 101.799 High  
cufflinks 29.2958 0.0 78.442 High  
cufflinks 24.3481 0.0 64.9637 High Low
cufflinks 39.8064 0.0 108.162 High High
cufflinks 40.8093 0.0 111.393 High High
cufflinks 33.5995 0.0 90.4806 High  
cufflinks 30.9508 0.0 83.0545 High  
cufflinks 35.9979 0.0 97.288 High  
cufflinks 29.3566 0.0 78.6641 High  
cufflinks 19.496     High High
cufflinks 13.562     High  
cufflinks 12.502     High  
cufflinks 18.792     High High
cufflinks 21.135     High High
cufflinks 9.361     High Low
cufflinks 12.52     High  
cufflinks 17.45     High  
cufflinks 16.667     High  
cufflinks 17.389     High  
cufflinks 10.685     High Low
cufflinks 14.977     High  
cufflinks 12.639     High  
cufflinks 15.505     High  
cufflinks 15.071     High  
cufflinks 10.462     High Low
cufflinks 17.152     High  

0 Strain