Gene : Glyma.15G072600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13780//PTHR13780:SF55 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT Genomic Order:  726
Name:  ? Glyma.15G072600 Secondary Identifier:  ? PAC:30495770
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G072600 0.5kb upstream 0.5kb upstream 2759 true Chr15: 5560260-5563018 Glycine max
Glyma.15G072600 0.5kb upstream 0.5kb upstream 500 false Chr15: 5560260-5560759 Glycine max
Glyma.15G072600 0.5kb downstream 0.5kb downstream 2759 true Chr15: 5560760-5563518 Glycine max
Glyma.15G072600 0.5kb downstream 0.5kb downstream 500 false Chr15: 5563019-5563518 Glycine max
Glyma.15G072600 1.0kb upstream 1.0kb upstream 3259 true Chr15: 5559760-5563018 Glycine max
Glyma.15G072600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5559760-5560759 Glycine max
Glyma.15G072600 1.0kb downstream 1.0kb downstream 3259 true Chr15: 5560760-5564018 Glycine max
Glyma.15G072600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5563019-5564018 Glycine max
Glyma.15G072600 2.0kb upstream 2.0kb upstream 4259 true Chr15: 5558760-5563018 Glycine max
Glyma.15G072600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5558760-5560759 Glycine max
Glyma.15G072600 2.0kb downstream 2.0kb downstream 4259 true Chr15: 5560760-5565018 Glycine max
Glyma.15G072600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5563019-5565018 Glycine max
Glyma.15G072600 5.0kb upstream 5.0kb upstream 7259 true Chr15: 5555760-5563018 Glycine max
Glyma.15G072600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5555760-5560759 Glycine max
Glyma.15G072600 5.0kb downstream 5.0kb downstream 7259 true Chr15: 5560760-5568018 Glycine max
Glyma.15G072600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5563019-5568018 Glycine max
Glyma.15G072600 10.0kb upstream 10.0kb upstream 12259 true Chr15: 5550760-5563018 Glycine max
Glyma.15G072600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5550760-5560759 Glycine max
Glyma.15G072600 10.0kb downstream 10.0kb downstream 12259 true Chr15: 5560760-5573018 Glycine max
Glyma.15G072600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5563019-5573018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301461 5265 Fabidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07393 0.0 10.2211    
cufflinks 1.34456 0.0 4.84157    
cufflinks 4.80695 0.0 15.1324    
cufflinks 4.2836 0.0 13.6303    
cufflinks 1.17606 0.0 4.2488    
cufflinks 8.10889 0.0 23.5601   High
cufflinks 1.16425 0.0 4.21731    
cufflinks 1.96715 0.0 6.86019    
cufflinks 0.733106 0.0 2.72624   Low
cufflinks 4.713        
cufflinks 8.68     High  
cufflinks 4.755        
cufflinks 1.279        
cufflinks 0.589       Low
cufflinks 8.574     High  
cufflinks 1.972        
cufflinks 28.671     High High
cufflinks 2.759        
cufflinks 1.367        
cufflinks 1.475        
cufflinks 4.754        
cufflinks 1.4        
cufflinks 2.984        
cufflinks 4.993        
cufflinks 1.488        
cufflinks 14.301     High High

0 Strain